Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03339 ATGGCTCAGCAGAGTCCTGATCAGCATATCAAGCCCTTGGCACCATTCATATCATCAACCCACTTCAACACACTAGAAGATCAAGACCACATATTCGTACAGAGAAAAAACATTCGCCTGAGAAAGTTTATCCTGTGCTGCGGTTGTGCCACTGCAATTGTTGTGTTACTTGTGGTCATAGTACTGGTCTTGAGCTTCACCGTTTACAATGTCAAAGACCCCGAGGTAAGGATGAACGGGGTTACCCTTATCAATGGAACTTTTGCCAGCGGTTCTACTGACAACGTTACACTTCTTGCTGATATATCTGTGAAGAATCCAAACGCTTTTACCTTCAGGTTTGGAAACGCCAGCACTGATGTTTACTATAATGGGGAGGGAATAGGAGAGGGTGAATCTCCATCGGGGAAAGCCAAGGCCAGAAGGACCATAAGGGTCAACACCACCATGGAGATTATGTCAAAGAAGCTTTTGGCGAATCCATTTTTGGATACTGACCTAAAGGATCGTGCTTTGAATTTCAGCAGCTATACCAGGATCCATGGTAAGGTCAAAATACTTTACATTTTTCCGAGGAAAGTTGCTGTTGAGATCAATTGCACAATTACATACAACATCACCACTGGGTTGATTACAAATGGTGACAATTGTATTGGAAACGTCGATCTTTAG 672 0.4315 MAQQSPDQHIKPLAPFISSTHFNTLEDQDHIFVQRKNIRLRKFILCCGCATAIVVLLVVIVLVLSFTVYNVKDPEVRMNGVTLINGTFASGSTDNVTLLADISVKNPNAFTFRFGNASTDVYYNGEGIGEGESPSGKAKARRTIRVNTTMEIMSKKLLANPFLDTDLKDRALNFSSYTRIHGKVKILYIFPRKVAVEINCTITYNITTGLITNGDNCIGNVDL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03339 223 Pfam Late embryogenesis abundant protein 102 201 IPR004864 -
Phco4g03339 223 Gene3D - 59 207 - -
Phco4g03339 223 SMART why 81 207 IPR013990 GO:0009269
Phco4g03339 223 SUPERFAMILY LEA14-like 54 149 - -
Phco4g03339 223 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 37 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03339 Phco-Chr4 53892141 53892812 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03339 4 53892141 53892812 Phco4g03339 4 53892141 53892812 ECH