Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03334 ATGACTTGGCGACACATTGCACGTGCGAGGAGTGGGGTCCCAGTTCCTAAAACGTTTGAGATAGGGTTTCAGACAGGATTCAGGAAGGAACGCACAGATGGGAGGCAAAGTAAGTGGCTACTCCCTCCGCCAAACCCAAAGAGGAACAAAACTATTGGCGACGTCGATGCTTCTCTAAACAACTCCGTTTGTCATTTCCGTTCTGGAAGCGGGGAAACGACGCCTTTTCCAATCACTACCTCGTCGTTTCGTTCCTTCCCCCGTTTTGCGTTTTGGATTCATTCGTTAAACCCTTTGCTTTGCCTTCTCTCTATCTCTTTTACCTTCTTCGGCTTTATCTTTAAGCCAAAGCGAGAACCCTTTTCTTCTCCTTCTCAAACCCATAACCCGATCCTCCGCTTTTCAAATTCTCGCGAGATGGACGAGAACTTGATAGACGATATTATCCGCCGGCTCGTTGCGGCGAAGAACGGTAGAACCACGAAGCAGGTGCAGCTTACGGAGGCGGAAATTCGACAACTCTGCGCTTCCTCTAAAGAGATCTTTCTCAGTCAACCCAATCTTCTCGAACTTGAGGCTCCGATTAAGATTTGTGGAGATGTTCATGGCCAATACTCAGATCTTTTAAGGCTGTTTGAATACGGGGGATACCCACCTGAAGCAAATTATTTATTTCTTGGAGATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGTTTACTCCTTGCATACAAGGTCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGCAACCATGAGTGCGCCTCCATCAACCGTATATATGGTTTCTATGATGAGTGTAAGAGGAGGTTTAATGTTCGCATCTGGAAGACATTTACTGAATGCTTTAATTGTCTACCTGTTGCTGCCCTGATAGATGAGAAGATTCTTTGCATGCATGGTGGACTATCACCTGATCTTAAACATTTGGATCAAATACGGAATATTGCTCGTCCTATTGATGTGCCAGATCATGGTCTTCTTTGCGACCTTCTATGGGCTGATCCTGATAAAGATCTTGATGGGTGGGGAGAAAATGATCGAGGTGTGTCATTTACATTTGGGGCTGACAAGGTTGTTGAATTTCTTGAACAACATGATCTTGATCTAATTTGCAGAGCTCACCAGGTTGTAGAGGATGGATACGAGTTTTTTGCCAAGCGTCAGCTGGTGACTATATTCTCTGCCCCTAATTACTGTGGTGAATTTGATAATGCTGGTGCTATGATGAGTGTGGATGACACCTTGACATGCTCTTTCCAAATACTTAAATCTTCTGAAAAGAAAGGGAAAGGTGGATCTGGCAACAACACATCAAGACCGGGAACTCCACCTCATAAGGGTGGGAAGAATTAA 1383 0.4454 MTWRHIARARSGVPVPKTFEIGFQTGFRKERTDGRQSKWLLPPPNPKRNKTIGDVDASLNNSVCHFRSGSGETTPFPITTSSFRSFPRFAFWIHSLNPLLCLLSISFTFFGFIFKPKREPFSSPSQTHNPILRFSNSREMDENLIDDIIRRLVAAKNGRTTKQVQLTEAEIRQLCASSKEIFLSQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRIWKTFTECFNCLPVAALIDEKILCMHGGLSPDLKHLDQIRNIARPIDVPDHGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEQHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKGKGGSGNNTSRPGTPPHKGGKN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03334 460 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 135 438 - -
Phco4g03334 460 Pfam Calcineurin-like phosphoesterase 194 386 IPR004843 GO:0016787
Phco4g03334 460 ProSitePatterns Serine/threonine specific protein phosphatases signature. 257 262 IPR006186 GO:0016787
Phco4g03334 460 MobiDBLite consensus disorder prediction 435 453 - -
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 290 316 IPR006186 GO:0016787
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 319 346 IPR006186 GO:0016787
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 398 414 IPR006186 GO:0016787
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 194 221 IPR006186 GO:0016787
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 376 396 IPR006186 GO:0016787
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 256 280 IPR006186 GO:0016787
Phco4g03334 460 PRINTS Serine/threonine phosphatase family signature 223 250 IPR006186 GO:0016787
Phco4g03334 460 SMART pp2a_7 166 436 IPR006186 GO:0016787
Phco4g03334 460 SUPERFAMILY Metallo-dependent phosphatases 160 436 IPR029052 -
Phco4g03334 460 Gene3D - 137 443 IPR029052 -
Phco4g03334 460 MobiDBLite consensus disorder prediction 435 460 - -
Phco4g03334 460 MobiDBLite consensus disorder prediction 31 50 - -
Phco4g03334 460 Pfam Serine-threonine protein phosphatase N-terminal domain 145 192 IPR031675 -
Phco4g03334 460 FunFam Serine/threonine-protein phosphatase 136 443 - -
Phco4g03334 460 CDD MPP_PP1_PPKL 145 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03334 Phco-Chr4 53849696 53853865 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03334 4 53849696 53853865 Phco4g03334 4 53849696 53853865 ECH