Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03333 ATGAAGTGCAGATCGGTGGCATGCATATGGTCCGGCACGCCGTTCCCTCACCGCGTCACCGCCGTCGCCGCTTTGACGGAACCGCCGACGCCGACCTTTTACACCGCCGGATCGGATGGCTCCATCATCTGGTGGACCCTCTCCAGTTCCACTTCCACACCGCAAGTTAAGGCGGTCGGCGTGTTGTGCGGTCACGGCGCACCGGTTACCGATCTCGCCGTCTGTAGGCCCATTGCTGATGCAGGAAACGGTTATACTTCGAGTGCAAGTAAGTTCAGTGCGTTGATAAGTGCGTGTTGTGATGGTTTTCTCTGTGTGTGGAGCAAAAACAGTGGCCATTGCCGGTGCCGGAGGAAATTGCCGCCTTGGGTTGGCACTCCTCGCTTAATTAGAACCTTGCCTTCGACACCGAGATATGTGTGTATAGCGTGTTCTTTAGAGGGGAACGAAGGATTAATTGATAGAGAAACTCAGCCTAGGAAGCCTCCTAAGTGCACTATCCTTATTGTGGACTCGTATTCGCTTTCCATTACTCAAACTGTGTTTCATGGAAGTTTATCCATTGGTCCAATTAAGTTTATGGCACTGGTGTTGGGTGATGACGAGAAGAGAAACTCCGTGTTTGTGGGTGATTCGGCTGGGAGGCAGCAGATGTTTCCAATATCTGAGGATCGAGGGGAAAGCTTGGCGGGTTCACTTGGAGATAAAGGTCAATTGGAGACCTCTTTTTGCGATGAGGGATTGAGTGATGTGGAGCAGATTGTTTCGGTTTTAACGTATGGGAATGTTGTTGCTTCAATATTGGAAGATCGGTGTGTCTTCAGGTTGCTGAATCATAGAGTGATTGGAGAAGTTTCTTTTGTCGATAGCTTATTCAGTTTGGATCAGGGTTCTACTCAAACACATGCCATTGGTGGCATTTTTCTTGAAAATGATGATGTGGGGAATTTGTGCAATGGCAATGAATATGGAAACTCAATTACAGTACGATTTGTTGTGTGGAATAATGTAGGTTATGCAGTTATATATAATGTGTTGTATCAGAATGATGTTTTCCATTGTGAACCTCTTTATGAGATTCCTGGTACTCGTTATCAACCTCATATGAGATTATCTGTTTTTTTTCAACAAGTAAATCAGTATCTTATATGCATCAAGTCAATTTGCTTTAATTATGAGGAGCCTTTACTTTGGAGACCACTTGCCACAATCTGGTCATTGCATGATTTTGGTGATGAACCTGGTAGATTGTATCGTCAATGCAGAATGATCGATTATGGTGTATCTTTCACCGACTGGTTTGAGAAATCGACTCAGCTCAAGGGGCTGGATGGTCTTGAGACTACTACTTTTGGTGTTACTCCAAGTTCTGATAATGTAGACAACGAACTTGTTGATACTGGAAGTAGTTATTATGCGTACAATGGGAAGGTCGTTACTTCCTCCATGATCATCTCTGAGAACCTTTTTACTCCTTATGCTGTTGTATACGGTTTTTTAAGTGGAGAAATAGAGGTTGTAAGGTTTGATCTGTTTCAAGGGATTTGCTTGGAAGATGCAGGTTCCAATCCTGATGAAAAGCCAACTGCATGCAAACAGTTCTTCTCAGGACATACAGATGCTGTACTTTGTTTGGCAGCACATCAAATGATGGGTAGTGCCAAAAGCTGGAATTTTAAGCAGGTTTTGGTGTCTGGAAGTATGGATTGCACGATTCGAATATGGGATCTTGACACTGGCAGCCTTATCATGGTAATGCATCATCATGTGGCTCCTGTGCGTCAAATTATTCTTCCTCCATCTTTGACTGTGCATCCTTGGAGTAATTGCTTCCTTTCAGTAGGAGAGGATGCGTGTGTTGCTCTTGTTTCTCTAGAGACTCTGAGAGTAGAGAGAATCTTTCCTGGACAAGTGAACTATCCTTCTAAAGTTTTATGGGACGGGGCAAGAGGTTATATTTCTTGTCTCTGTCAAACACATTACGGAACTTCTGATGCCACTGATGTATTATACATTTGGGATGTAAAGACAGGTTCACGGGAACGAGTCCTACGTGGGACAGCTGCACATTCAATGTTTGATCATTTTTGTAAAAGCATCAGCATGAATTCCATATCTGGCACATTGCTGAATGGAAACACATCAGTCTCTTCCTTACTCCTTCCGATAGTTGATGATGCAAGGTTCTCTAACTCCCACTTAAATCGTTCAGACAAGTTGCTTACTTCATCAAGGTCGTCACCAAATATTTCAAATATGACTGAGCTGAATTCTTCCAAAACAAATACAGGTAAAGAAATTTCAGTGAAGCCAGATTCATCCTCTTTGATTGGTCTTTTGAGTAGCAAGCTTCCTATCAAATGCGCTTGCCCTTTCCCAGGGATTGTGTCTCTGTGTTTTGATCTTTCATCCTTGATGTTCTTATTTCAAAAGAATGAGTCCACCGAAAATGTTGGTGGCAAGCCAGTGAATATCAATTTGAAGCAGCAGGGCAGCTATCATAATTCAGAAACTTTAGAGGGGCATGACTTGGTTAACCTATTTGAAGAATACTTACTTCGATATAGCTTGTCATATCTACATTCGTGGAGTGTAGACATAGAGCTTGATAATTTGTTGATAAGTGACATGAAGCTGAGGAGACCAGAAAATTTCATAGTAGGTTCTGGTCTGCAGGGGGATAAAGGGTCATTGACATTGACATTTCCTGCTCAGAGTGCTACTCCTGAGCTCTGGAAATCATCATCCGAGTTTTGTGCAATGAGATCATTGACAATGGTGTCCCTTGCCCAACGTTTGATTAGCTTGTCTCACTCTGGTTCAGCAGCCAGCAGTGCTTTAGCAGCCTTCTATACTCGGAATTTCCTGGAAAATTTTCCAGATGTGAAGCCACCTTCATTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTGCGTATGGCTGCACGCTCTATATTTCATTGTGCTGCCTCTCATGTTATTCCTCTACCTCTACGCAATTTGAAACCTACTGAGTCAAACAATATGAGTTTTCATACTGGAAGTAGAGACATGCATAATCTAGGAAATACGAGGGAAGATAGTATATCTCCTAAGGTAGACAAACAAGGAATTTCCCAAGATGAGGAATCCAAGATACTTGCTTGGCTAGAATCATTTGAAGTGCATGATTGGATTTCTTGTGTTGGTGGAACTAGTCAGGATGCAATGACATCTCACATTATTGTTGCTGGTGCACTGGCTATCTGGTATACTAGTCTTGTAAAGCCAGGTCTTGCCAGGCTAGTCGTTCATCCGTTAATGAAGTTGGCTATGGCTATGAATGAGAAGTATAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGTACATGGAAAGAATGCATTGTCTCTGAGATTCCACGTCTGATTGGGGATATTTTTTTCCAAGTAGAGTTAAGTGGCCCATCTTCCAAGTCAGTGAAAGAAATTTCAGATGCATCTTTTTCTATTAAAAAGACTTTGGTGGAGGTTCTTCTTCCAAGTTTAGCTATGGCTGATATAGCAGGCTTTTTGGCTGTGATTGAAAGTCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACATGGTGTCGTTGTTGACTCTTATAAGGATCATGCATGGTTCTCCAAAGAATTTGGCTCAATACCTTGACAAGGTGGTCAACTTCATTTTACAGACTATAGATCCTAGCAACTCAGTCATGCGGAAGGCATGCTTCCAGAGTTCAATGACAACTTTCAAGGAACTTGTACGTGTATATCCCATGGTGGCTGTCAATGATTCATGGACCAAACTAGCAGTTGGAGATGTAATTGGAGAAATTAACAACGCAAACATCAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGACCTCCTGGACTTCCAACTCTATTCCCAGCATCATCATCAGGAACAATGTTGACCACTGCTATTTCAGCACTGAGCTTTTCACCAGATGGAGAGGGGCTGGTGGCTTTTTCTGAAAATGGGCTACTGATTAGATGGTGGTCACTAGGATCTTTCTGGTGGGAGAAACTAAGCCGGAACTTTGTTCCTGTCCAGTGCACCAAACTAATATTTGTTCCTCCTTGGGAAGGATTTTCACCTAATTCTTCAAGATCAAGCATAATGGCCAATATTTTGGAAACTGACAGGTTGCTGAACTTTCAGGACAATGCGAGGGATTCAAATCACGGGGACAGTCCAAAACAATTGCTTCATAATTTGGATCTCTCCTATAGACTTGAATGGATTGAGGGGCGGAAAGTACTTCTTACAAGACACGGTCATGAATTGGGCACTTTTCAGTTATAA 4374 0.428 MKCRSVACIWSGTPFPHRVTAVAALTEPPTPTFYTAGSDGSIIWWTLSSSTSTPQVKAVGVLCGHGAPVTDLAVCRPIADAGNGYTSSASKFSALISACCDGFLCVWSKNSGHCRCRRKLPPWVGTPRLIRTLPSTPRYVCIACSLEGNEGLIDRETQPRKPPKCTILIVDSYSLSITQTVFHGSLSIGPIKFMALVLGDDEKRNSVFVGDSAGRQQMFPISEDRGESLAGSLGDKGQLETSFCDEGLSDVEQIVSVLTYGNVVASILEDRCVFRLLNHRVIGEVSFVDSLFSLDQGSTQTHAIGGIFLENDDVGNLCNGNEYGNSITVRFVVWNNVGYAVIYNVLYQNDVFHCEPLYEIPGTRYQPHMRLSVFFQQVNQYLICIKSICFNYEEPLLWRPLATIWSLHDFGDEPGRLYRQCRMIDYGVSFTDWFEKSTQLKGLDGLETTTFGVTPSSDNVDNELVDTGSSYYAYNGKVVTSSMIISENLFTPYAVVYGFLSGEIEVVRFDLFQGICLEDAGSNPDEKPTACKQFFSGHTDAVLCLAAHQMMGSAKSWNFKQVLVSGSMDCTIRIWDLDTGSLIMVMHHHVAPVRQIILPPSLTVHPWSNCFLSVGEDACVALVSLETLRVERIFPGQVNYPSKVLWDGARGYISCLCQTHYGTSDATDVLYIWDVKTGSRERVLRGTAAHSMFDHFCKSISMNSISGTLLNGNTSVSSLLLPIVDDARFSNSHLNRSDKLLTSSRSSPNISNMTELNSSKTNTGKEISVKPDSSSLIGLLSSKLPIKCACPFPGIVSLCFDLSSLMFLFQKNESTENVGGKPVNINLKQQGSYHNSETLEGHDLVNLFEEYLLRYSLSYLHSWSVDIELDNLLISDMKLRRPENFIVGSGLQGDKGSLTLTFPAQSATPELWKSSSEFCAMRSLTMVSLAQRLISLSHSGSAASSALAAFYTRNFLENFPDVKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHVIPLPLRNLKPTESNNMSFHTGSRDMHNLGNTREDSISPKVDKQGISQDEESKILAWLESFEVHDWISCVGGTSQDAMTSHIIVAGALAIWYTSLVKPGLARLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECIVSEIPRLIGDIFFQVELSGPSSKSVKEISDASFSIKKTLVEVLLPSLAMADIAGFLAVIESQIWSTASDSPVHMVSLLTLIRIMHGSPKNLAQYLDKVVNFILQTIDPSNSVMRKACFQSSMTTFKELVRVYPMVAVNDSWTKLAVGDVIGEINNANIRVYDMQSVTMIKVLDASGPPGLPTLFPASSSGTMLTTAISALSFSPDGEGLVAFSENGLLIRWWSLGSFWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILETDRLLNFQDNARDSNHGDSPKQLLHNLDLSYRLEWIEGRKVLLTRHGHELGTFQL 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03333 1457 SUPERFAMILY WD40 repeat-like 18 686 IPR036322 GO:0005515
Phco4g03333 1457 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1457 - -
Phco4g03333 1457 MobiDBLite consensus disorder prediction 1022 1041 - -
Phco4g03333 1457 SMART WD40_4 528 576 IPR001680 GO:0005515
Phco4g03333 1457 SMART WD40_4 55 108 IPR001680 GO:0005515
Phco4g03333 1457 SMART WD40_4 5 46 IPR001680 GO:0005515
Phco4g03333 1457 SMART WD40_4 1319 1357 IPR001680 GO:0005515
Phco4g03333 1457 SMART WD40_4 579 624 IPR001680 GO:0005515
Phco4g03333 1457 Gene3D - 491 790 IPR015943 GO:0005515
Phco4g03333 1457 ProSiteProfiles Trp-Asp (WD) repeats profile. 535 585 IPR001680 GO:0005515
Phco4g03333 1457 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 526 587 - -
Phco4g03333 1457 SUPERFAMILY ARM repeat 927 1288 IPR016024 -
Phco4g03333 1457 MobiDBLite consensus disorder prediction 1015 1041 - -
Phco4g03333 1457 ProSitePatterns Trp-Asp (WD) repeats signature. 563 577 IPR019775 -
Phco4g03333 1457 Gene3D - 5 234 IPR015943 GO:0005515
Phco4g03333 1457 SUPERFAMILY WD40 repeat-like 1269 1361 IPR036322 GO:0005515
Phco4g03333 1457 Pfam WD domain, G-beta repeat 531 576 IPR001680 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03333 4 53836632 53847345 Phco4g03333 4 53836632 53847345 ECH