Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03320 ATGTGCAAATTACTCACGATCAGAATCGTCCGTCCACAAAAGTCAAATCGGTTCCCGGTGGACACTCGTCGCTTGGATACTTGTTCGGAGACAAGTGATGGCTTTCACTTTTATCTCCAATTCCCTTATTCCGGTGCCTCTCTCAATTTCAGTTCTGTTGTACTGCAAGTACTGTCTCCAGAAAAAGCCATGCATCAGTGTGTGCTTTCTATGTCACGTAGTTCAATTAAGTGTGGCCTTTATTTGCTTTGTTTTGATTTTCATGGTTTGCATAAAGTTCAGCTTAACGCCGCACCAGTTCTCCCCTCAAGAATTCAGGTCATGGATGCGTTGCTGTCATTATGTGTTCTTTTAGTTGCTTTGCCAAACATGGCTGTAGTGGAGAGCCGCAAAGCTCCAGTTCTGGACTACTTTGAGTATTGTGCTATGAGCTGCAGAGCTTATAGTGCCTCATTGGAAGAATTTGGAGGTGTTGGTGATGGAACAACTTTGAATACCAAAGCCTTTCAGGCAGCCATAGATCATCTGAGTCAGTATGCATCAAGTGGAGGGTCTCAACTTTATGTTCCCCCAGGAAGATGGTTAACTGGCAGCTTCAATCTCACCAGCCATTTCACTTTATTCATACACAAGGATGCTGTGATTCTCGCCTCTCAGGATGAAAAAGACTGGCCAGTAATTGATCCCTTGCCATCTTACGGCAGAGGGAGGGACACCCAAGGTGGAAGGTTTAGCAGCCTAATTTTTGGGACCAACCTCACTGATGTAATCATAACTGGGGACAATGGCACATTGGATGGACAAGGTGATCTGTGGTGGCAAAAATTTCACAAGGGGGAGCTCAATTATACCAGGCCTTACCTGATTGAAATCATGTACTCAGATAATGTTCAGATATCCAATCTCACTTTGGTGAACTCTCCATCGTGGAATGTTCATCCTGTATACAGCAGCAACGTTGTTGTTCAAGGGATCACAATTCTTGCTCCCGTGACATCTCCAAATACAGATGGAATCAACCCTGACTCTTGCACAAACACAAGAATTGAAGACTGTTATATTGTGTCCGGGGATGACTGTGTGGCTGTGAAGAGTGGTTGGGATGAGTATGGTATAGCTTATGGAATGCCAACAAAGCAGCTTGTAATCAGAAGACTCACTTGTATTTCTCCATTCAGTGCTGTGATTGCTTTAGGGAGTGAGATGTCTGGTGGGATCCAAGATGTGAGAGCTGAGGACATTGTAGCCATCAATACAGAATCAGGGGTTAGAATCAAAACTGCTGTAGGAAGAGGAGGATATGTTAAGGACATATATGTCAGAAGAATGACCATGAAAACCATGAAATGGGCATTTTGGATGACAGGAAATTACGGGTCCCATGCTGATGACAAGTATGATCCTAATGCCCTTCCTGTGATTCAGAACATAAACTATCGCGATATGGTTGCTGAGAATGTCACTATGGCTGCGAGGTTGGAGGGTATCTCTGGTGACCCTTTTACTGGAATCTGCATATCTAATGTAACCATTCAACTGGCAAAGAAGGCTAAAAAAGTTCCATGGACTTGCACTGATATTGATGGGATTTCAAGCGATGTCACTCCTGCACCATGTAATCTGTTGCCAGAACAAGAAGAAGAGAATTTTGGAGCATGTACCTTCCCAGAAGAAAGTTTGCCAATTGAAGATGTCCAGGTTCAAACGTGCACTTACAGTAGGAATTTATGA 1731 0.4367 MCKLLTIRIVRPQKSNRFPVDTRRLDTCSETSDGFHFYLQFPYSGASLNFSSVVLQVLSPEKAMHQCVLSMSRSSIKCGLYLLCFDFHGLHKVQLNAAPVLPSRIQVMDALLSLCVLLVALPNMAVVESRKAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGRWLTGSFNLTSHFTLFIHKDAVILASQDEKDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTLDGQGDLWWQKFHKGELNYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPVYSSNVVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINTESGVRIKTAVGRGGYVKDIYVRRMTMKTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIDGISSDVTPAPCNLLPEQEEENFGACTFPEESLPIEDVQVQTCTYSRNL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03320 576 Pfam Glycosyl hydrolases family 28 243 519 IPR000743 GO:0004650|GO:0005975
Phco4g03320 576 Gene3D - 140 533 IPR012334 -
Phco4g03320 576 PANTHER PECTIN LYASE-RELATED 118 564 - -
Phco4g03320 576 SUPERFAMILY Pectin lyase-like 142 547 IPR011050 -
Phco4g03320 576 FunFam Glycoside hydrolase family 28 protein 136 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03320 Phco-Chr4 53738229 53745307 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03320 4 53738229 53745307 Phco4g03320 4 53738229 53745307 ECH