Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03310 ATGTCTTCCCCTAGCAAACGCCGAGACATGGACCTGATGAAACTGATGATGAGTGATTACAAGGTGGAGATGATCAACGATGGCATGCAAGAGTTCTTTGTGGAATTCCGGGGACCTAAAGATAGTCCCTATGAGGTTGGTGTGTGGAAGATAAAGGTGGAGCTACCTGATGCTTATCCCTATAAGTCTCCATCTATTGGCTTTGTCAACAAAATTTTCCATCCTAATGTTGATGAACTGTCTGGTTCTGTATGCTTAGATGTTATTAACCAGACTTGGAGCCCCATGTTTGACCTTGTTAATGTGTTTGAGGTGTTTCTTCCTCAACTTCTTCTGTATCCCAATGCATCAGATCCATTGAATAGTGATGCTGCTGCCTTGATGATCCGAGATCATGCTACATATGAACAAAGAGTCAAAGAATATTGTGAGAAATATGCCAAGCCAGAAGACATTGGAGCTGTAGAGGATACAGATTCTAGCGAGGATGAGCTGAGTGAAGATGCTTATGCCTCTAGTGATGATGCCATCGTTGGCCAACCTGATCCTTAG 552 0.4312 MSSPSKRRDMDLMKLMMSDYKVEMINDGMQEFFVEFRGPKDSPYEVGVWKIKVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNASDPLNSDAAALMIRDHATYEQRVKEYCEKYAKPEDIGAVEDTDSSEDELSEDAYASSDDAIVGQPDP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03310 183 CDD UBCc 10 143 IPR000608 -
Phco4g03310 183 MobiDBLite consensus disorder prediction 156 170 - -
Phco4g03310 183 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Phco4g03310 183 Pfam Ubiquitin-conjugating enzyme 11 142 IPR000608 -
Phco4g03310 183 SUPERFAMILY UBC-like 4 148 IPR016135 -
Phco4g03310 183 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Phco4g03310 183 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Phco4g03310 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Phco4g03310 183 Gene3D Ubiquitin Conjugating Enzyme 1 159 IPR016135 -
Phco4g03310 183 MobiDBLite consensus disorder prediction 150 183 - -
Phco4g03310 183 SMART ubc_7 4 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03310 Phco-Chr4 53596711 53599385 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03310 4 53596711 53599385 Phco4g03310 4 53596711 53599385 ECH