Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03308 ATGGCACGGTTGGTTCTACCATCGAAGAGATTATCTCTTTCGAGGAACGCTCTACTGGGTTTGATCTCCCCTGCTCCTCTTCAGCTTAATTGCAGTGTTAGTTATTTTCAGAATACAGCAAAAAGAAGCATCCGATACAAGCATTGCGTTGCTTCAGAGATTAATTTTCAGAAGAAGTATTCCCCATTATATTCTTCACTACCAAGGGTCAAGCAAGTAAGTAAGAGGCTAATTTGTGCTGTTGCCACAGAGGATTTATCAAAGCAAGTTGAAGAATCTAAAATGGAGACACCAAAGGAAATATTCTTAAAGGATTATAAGAAGCCTGATTACTACTTTGACACTGTGGATCTAAAATTTTCCTTGGGAGAGGAGAAGACAACAGTTAGTTCTAAAATTGCTGTGTATCCTCGCATTGAAGGTTCTTCTCCCCCTCTAGTTTTAGATGGACAAGATGTGTCTTTAGTTTCAGTTCAGCTGAATGGAAAGGCTTTGAAGGAGGAAGATTATCATTTGAATGCACGTCATCTCACAATCCTATCACCTCCTAGTGGTAAATATGATCTCGAAATTGTCACAGAGATTTGTCCACAGAAAAATACATCATTAGAGGGACTTTACAAATCGTCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGTTTCCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACAGTTCGCATTGAGGCTGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTGGCTGAGCAAGGTGACCTGCAGGACGGGAGGCATTATGCTGTTTGGGAGGACCCCTACAAGAAACCTTCTTACCTGTTTGCCTTGGTTGCCGGACAATTACAGAGCAGAGATGACACATTCATTACCCGTTCAGGGCGGAATGTGTCCCTTAGGATATGGACACCTGCAGAAGATGTACCTAAGACTGCACATGCTATGTATGCTCTGAAAGCGGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAGAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAAACTGCTACTGATGCAGATTATGCTGCAATATTGGGGGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACGTGTCGTGACTGGTTCCAGCTTAGCCTGAAAGAAGGTCTCACCGTTTTTCGTGATCAGGCAAGCCTCTGTACCCCAGTTTCCTATGAATTTTCATCTGATATGGGAAGTCGTACTGTAAAACGGATTGCTGATGTTTGTAAACTTAGAAATTACCAGTTTCCACAGGATGCTGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGATGGACAACTTCTACACAGTTACGGTATGTTTCAGATTCTTTGGTTGTGACGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTTTTGGGAAGCCAAGGGTTCCGAAAAGGCATGGATCTTTATTTCAAGAGACATGATGGTCAAGCTGTAACATGTGAAGATTTTTTTGCTGCCATGAGGGATGCAAATGATGCTGATTTTGCAAATTTCTTGCTGTGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAAGACTTCTTATAATTCAGAAGCACATACTTTTTCTTTGAATATTAGTCAAGAGATACCACCAACTCCAGGACAATCAGTTAAGGAACCCACGTTCATTCCTGTTGCAGTGGGTTTGCTTGATTCCACCGGCAAGGACATTCCTCTTTCAAGTGTTTATCATAACGGGAATCTGCGATCTGTTTCAAACGGTGATCAACCAGTCTTCACTACAGTCCTTATAGTGACCAAGAATGAGGAAGAGTTTGTATTCACTAATATATTTGAGAGGCCTGTTCCTTCTCTGTTAAGGGGATACAGTGCTCCTGTTCGTCTGGAATCTGATCTCACTGAGAGCGACCTGTTTTTCCTGCTAGCTAATGATTCTGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAATTGATGCTTAGCTTGGTGGATGATTTTCAACATGACAAACCATTGGTTTTGAATCCCAATTTTGTTGATGGGTTCAAGCGTATTCTATGTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCTGGGGAAGGAGAAATAATGGACATGATGGAGGTTGCAGATCCAGATGCTGTTCATGCTGTTCGGACTTTCATCAGGAATCAGCTTGCAAGTGAACTGAGATCAGAGTTCCTCAGCACAGTAGAAAATAATAAGAGCACAGAAGAATATGTCTTCAATCACTCAAACTTGGCCAGGCGTGCTCTGAAGAATATTGCTCTTGCTTATCTTGGATGCCTCAAGGAACAAGAATTCACCAATCTTGTGCTGCAAGAGTACAAATCTGCCACAAATATGACTGAACAATTTGCTGCTTTGGCTGCCATAGCCCAGAACCCCGGTAAAACCCGCGATGATGTTCTAGCTGATTTTTATGGAAAGTGGCAGCATGATTTCTTGGTGATCAACAAATGGTTTGCTCTGCAAGCAATGTCTGATATTCCTGGTAATGTTGAGAATGTGCGGAAACTATTAAACCACACAGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGATCTCCGGTGAACTTTCATGCAAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTAGACAAGCTAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTCATGACGAAGACAGACAAAAACTTGCGAAGGCTCAGTTGGAGAGGATCATGTCTAGTAATGGACTATCGGAGAATGTGTTTGAGATAGCCTCGAAAAGCTTAGCTGCTTGA 3000 0.423 MARLVLPSKRLSLSRNALLGLISPAPLQLNCSVSYFQNTAKRSIRYKHCVASEINFQKKYSPLYSSLPRVKQVSKRLICAVATEDLSKQVEESKMETPKEIFLKDYKKPDYYFDTVDLKFSLGEEKTTVSSKIAVYPRIEGSSPPLVLDGQDVSLVSVQLNGKALKEEDYHLNARHLTILSPPSGKYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLQDGRHYAVWEDPYKKPSYLFALVAGQLQSRDDTFITRSGRNVSLRIWTPAEDVPKTAHAMYALKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQASLCTPVSYEFSSDMGSRTVKRIADVCKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVCFRFFGCDVYEKGAEVVRMYKTFLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPVVKVKTSYNSEAHTFSLNISQEIPPTPGQSVKEPTFIPVAVGLLDSTGKDIPLSSVYHNGNLRSVSNGDQPVFTTVLIVTKNEEEFVFTNIFERPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWEAGQVLARKLMLSLVDDFQHDKPLVLNPNFVDGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRNQLASELRSEFLSTVENNKSTEEYVFNHSNLARRALKNIALAYLGCLKEQEFTNLVLQEYKSATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVINKWFALQAMSDIPGNVENVRKLLNHTAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKLNPQVASRMVSAFSRWKRHDEDRQKLAKAQLERIMSSNGLSENVFEIASKSLAA 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03308 999 FunFam Aminopeptidase N 108 291 - -
Phco4g03308 999 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 999 IPR012779 GO:0008270
Phco4g03308 999 FunFam Puromycin-sensitive aminopeptidase 674 998 - -
Phco4g03308 999 CDD M1_APN 105 556 - -
Phco4g03308 999 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 99 289 IPR042097 -
Phco4g03308 999 NCBIfam aminopeptidase N 105 997 IPR012779 GO:0008270
Phco4g03308 999 Pfam Peptidase M1 N-terminal domain 109 283 IPR045357 -
Phco4g03308 999 Gene3D - 559 672 IPR038438 -
Phco4g03308 999 Pfam Peptidase family M1 domain 325 551 IPR014782 GO:0008237|GO:0008270
Phco4g03308 999 FunFam Putative aminopeptidase N 293 376 - -
Phco4g03308 999 Pfam Domain of unknown function (DUF3458_C) ARM repeats 677 998 IPR024601 -
Phco4g03308 999 FunFam Aminopeptidase N 377 558 - -
Phco4g03308 999 Pfam Domain of unknown function (DUF3458) Ig-like fold 559 672 IPR035414 -
Phco4g03308 999 Gene3D Neutral Protease Domain 2 377 558 IPR027268 -
Phco4g03308 999 Gene3D - 292 376 - -
Phco4g03308 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Phco4g03308 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Phco4g03308 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Phco4g03308 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Phco4g03308 999 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Phco4g03308 999 Gene3D - 674 998 IPR037144 -
Phco4g03308 999 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 565 - -
Phco4g03308 999 FunFam Aminopeptidase N 559 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03308 Phco-Chr4 53573484 53582614 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03308 4 53573484 53582614 Phco4g03308 4 53573484 53582614 ECH