Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03306 ATGCCACCTTTTGCAGGTTCTGAACCAGCTGGGTTCCCCAAGCCCGATTCCAACATAGTTTCCATCGACGTCGGAGGCCAAGTGTTCCAAACCACCAAACAGACACTAACCTCAGCGGGTCCAAAAACCTTCTTCTCCAGAATTGCGGAATCTTCTGGAATCTACACGCCGTTCATCGACAGAGACCCGGAAATGTTCTCGCTGCTCCTCTCTCTCCTTCGCACCGGAAACCTTCCCTCAAAGGCCAAAGCTTTTGATATCCAAGACCTAATTATTGAGTCAAAATTCTACGGCATCGAAACCCTCCTTGTCAATTCCCTCTCCAACCCTTCTCAGCTGGAACCCTTCAACCTCCAAAAATCTCTCCTTTTGCCCCTCAACGGCCGCGACTCCCCCTCCGCTCTCGCCGCCGACGGCGCCTGCGGCGCCCTCCACGTCGCGCACGGCAGCAAGATCACCTCCTTCGACTGGTCCCTCCGCCGCAAGGCCACCGTCCTCACCCACTTCACCGCCGTCGACTCCCTCCTCGCGCTCTCGCCGGCGCTGGTTGCTGCCGGCGCCAACGACTTCTCCGGCCTCCAGATCCTGGACCTCGAAAAAGTCCGCGTCAGGGAAACCCTAAACTGGGAAAACGTCACCAAATCCGGGTCCACCGTCCAGGCCATCGGATCCTCCACGGAAAACATGTTCGTCAGCTTCGAATCCTCGCGCCGAAACTCCAATTCCATATTGGTTTACGATTTGCATACTCTAACCCCCGTCACCGAGATCGGTCACAACGAAATCTTCGGCGCAGACATCGATTCAGCAATTCCCGCGACGAAGTTGCAGTGGATTGAGGGTTACAATTTGTTGATGGCCTCTGGGTCCCACAGTGGGCCCTCCGGCGTCTCCGGTAACATACGATTGTGGGATGTTCGGTCCGGTAACATTGTCTGGGAGATTTCGGAGAAGGTGGATTGTTTTGCTGACGTGGCGGTTTCCGATGGGTTGTCGGTAATTTTTAAGGTTGGGGTGAATTCGGGCGAAGCGTCGTACGTGGACATGCGGAATCTGAGCAATGAGAGCGCCTGGGTGTGTCTTGGAGATAAAAGAAAGGTAATGAACAGTGGGAAGAAGGAAGGGATTGGCAGCAAAATCAAAACGCAGGGAAATCAAGTGTTTTGCACCAAGGGTGGTGACGTGGAGCTCTGGTCTGAGGTTGTTATGGGCTCTGGGAATACTGGGAGAATCTTCAAGAAGAACTTGATGGGTAGGATGAGGGACATGGGTGGTGCAAAGATTACCAATTTGGCCTTTGGAGGAAGCACCATGTTCTTGACCAGGAAGGATCAGCAATGTGTTGAGGTGTGGCAGAGTTCTTCAAGGGAATTTTGA 1377 0.5367 MPPFAGSEPAGFPKPDSNIVSIDVGGQVFQTTKQTLTSAGPKTFFSRIAESSGIYTPFIDRDPEMFSLLLSLLRTGNLPSKAKAFDIQDLIIESKFYGIETLLVNSLSNPSQLEPFNLQKSLLLPLNGRDSPSALAADGACGALHVAHGSKITSFDWSLRRKATVLTHFTAVDSLLALSPALVAAGANDFSGLQILDLEKVRVRETLNWENVTKSGSTVQAIGSSTENMFVSFESSRRNSNSILVYDLHTLTPVTEIGHNEIFGADIDSAIPATKLQWIEGYNLLMASGSHSGPSGVSGNIRLWDVRSGNIVWEISEKVDCFADVAVSDGLSVIFKVGVNSGEASYVDMRNLSNESAWVCLGDKRKVMNSGKKEGIGSKIKTQGNQVFCTKGGDVELWSEVVMGSGNTGRIFKKNLMGRMRDMGGAKITNLAFGGSTMFLTRKDQQCVEVWQSSSREF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03306 458 Gene3D - 134 458 IPR015943 GO:0005515
Phco4g03306 458 Gene3D Potassium Channel Kv1.1; Chain A 13 110 IPR011333 -
Phco4g03306 458 SUPERFAMILY WD40 repeat-like 147 352 IPR036322 GO:0005515
Phco4g03306 458 Pfam BTB/POZ domain 20 105 IPR003131 GO:0051260
Phco4g03306 458 SMART BTB_4 18 114 IPR000210 GO:0005515
Phco4g03306 458 CDD BTB_POZ_KCTD-like 20 97 - -
Phco4g03306 458 SUPERFAMILY POZ domain 17 104 IPR011333 -
Phco4g03306 458 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 14 455 IPR045068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03306 Phco-Chr4 53561453 53562829 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03306 4 53561453 53562829 Phco4g03306 4 53561453 53562829 ECH