Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03305 ATGGAGGCATCAACGGCTTTAATGTTCCTATCTGCAATAGCGGCCTATTTAATATGGTTCACCTTCGTCACTCGCTCCCTCAAAGGTCCACGTGTCTGGCCCCTACTAGGCAGCCTCCCCGGCCTCATCCAACATGCCAACCGCATGCATGACTGGATCGCTGACAACCTACGCGCCTCCGGTGGCACCTACCAAACCTGCATCGCCGCCCTCCCCTTCCTCGCACGCAAACAGTGTCTCATCACTGTCACCTGCGACCCCAAAAACCTCGAGCACATCCTCAAGCTCCGCTTCGACAACTATCCCAAGGGCCCCACCTGGCAGTCCGCCTTCCATGATTTGCTCGGTCAGGGTATCTTCAACTCTGACGGCGACACCTGGCTCTTCCAGCGTAAAACAGCGGCGCTCGAATTCACCACGCGCACCCTGCGCCAAGCCATGGCGCGTTGGGTCAACCGAGCCATAAAGCACAGGTTCTGCCCCATCCTTGCCACGGCTCAGCGAGAGAACAAATCGGTCGACCTCCAAGACCTCTTGCTTCGCCTCACTTTCGACAACATATGCGGCTTGGCTTTCGGCCAGGACCCCCAGACTCTTGCCGCGGGGCTCCCAGACAACGCTTTCGCTCTTTCCTTTGACAGCGCCACCGAAGCCACTTTACAACGCTTCATTCTGCCGGAGACTCTTTGGAAGCTCAAGCGATGGCTCCGCCTCGGCATGGAAGTGAGCCTTAGCCGAAGCCTCAAACACATTGACCAATACCTCTCCAGCATCATCAAGAACCGCAAACTGGAACTCCTCAACGGCACTGGCTCCCACCACGACGACCTCATGTCTCGCTTCATGAGAAAAAAAGAAACCTACTCAGACGAGTTCCTCCAACACGTGGCACTCAACTTCATTCTCGCTGGACGCGACACGTCATCGGTCGCCCTCAGCTGGTTCTTCTGGCTCTGTATCAAGAACCCGCGCGTGGAGGAAAGCATCCTTAACGAACTCTGCACTGTTCTGCTCTCCACTCGTGGGGAAGACATCTCCACGTGGCTGGAAGAACCTCTCGTGTTCGATGAGGTAGACCGTCTCGTCTATCTCAAAGCAGCCTTGTCCGAGACGCTGCGACTTTATCCTTCTGTTCCTGAAGACTCCAAACATGTGATTGCGGACGATGTTCTCCCCAACGGGACTTTCGTTCCGGCGGGCTCCTCCGTGACGTATTCGATTTACTCCGTTGGGAGGATGAAGTTCATATGGGGAGAGGATTGCCTCGAGTTCAAGCCAGAGCGGTGGCTCTCTCCCGAAGGGGACCGAATTCAGCTTCAAGACTCTTACAAGTTTGTTTCCTTCAATGCGGGACCGAGGCTTTGTTTGGGGAAGGACCTGGCCTACTTGCAGATGAAGACCATTGCGGCGGCGGTGCTGCTGCGCCACCGCCTGGCAGTCGCGGCGGGGCACCGCGTGGAGCAGAAGATGTCGCTCACGCTCTTCATGAAGTACGGTCTGAAGTTGAACGTGTACCCTAGGGATCTGAAACCGGTGCTGGAAAAGATAAAAATGACCCAGGGTGTTAATGTTGGTCAAAAGTCTCTTTGA 1590 0.5566 MEASTALMFLSAIAAYLIWFTFVTRSLKGPRVWPLLGSLPGLIQHANRMHDWIADNLRASGGTYQTCIAALPFLARKQCLITVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILATAQRENKSVDLQDLLLRLTFDNICGLAFGQDPQTLAAGLPDNAFALSFDSATEATLQRFILPETLWKLKRWLRLGMEVSLSRSLKHIDQYLSSIIKNRKLELLNGTGSHHDDLMSRFMRKKETYSDEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPRVEESILNELCTVLLSTRGEDISTWLEEPLVFDEVDRLVYLKAALSETLRLYPSVPEDSKHVIADDVLPNGTFVPAGSSVTYSIYSVGRMKFIWGEDCLEFKPERWLSPEGDRIQLQDSYKFVSFNAGPRLCLGKDLAYLQMKTIAAAVLLRHRLAVAAGHRVEQKMSLTLFMKYGLKLNVYPRDLKPVLEKIKMTQGVNVGQKSL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03305 529 CDD CYP86A 67 500 - -
Phco4g03305 529 FunFam Cytochrome P450 21 510 - -
Phco4g03305 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Phco4g03305 529 Pfam Cytochrome P450 28 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 Gene3D Cytochrome P450 19 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 SUPERFAMILY Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PANTHER CYTOCHROME P450 19 500 - -
Phco4g03305 529 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco4g03305 529 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03305 Phco-Chr4 53541191 53542780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03305 4 53541191 53542780 Phco4g03305 4 53541191 53542780 ECH