Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03302 ATGTGGTTTCTCGGTTGGAAAGGGGCGTCGGGATTCTCAGCATCATCTACAGCCGAACAAGTCACTGAAGGGATTGATGGAACCGCTCTCACCGCCATCGTCACAGGAGCATCAAGTGGTCTTGGTCTGGAGACCACCCAGGTTCTTGCATCCCGCGGTGTCCATGTTGTTATGGCAGTAAGGAATGTGGACAGTGGTAAGAATGTCAAAGAAACTATTCTTAAGGAAATTCCCTCGGCTAAAATCGATGTTATGGAGTTAGATCTAAGCTCTATGGCATCGGTAAGGAAATTTGCAGCAGATTTTAACTCATCTGGTCTTTCACTCAATATCCTAATTAACAATGCTGGGGTGATGGCAACTCCATTCATGCTTTCCCAGGACAATATAGAATTGCAGTTCGCTACCAATCATTTAGGTCATTTTCTCTTGACAAACCTTTTATTGGAAACTATGAAAAAAACAGTACGAGAATGCGAACAGGAAGGAAGGATAGTTATTCTATCATCAGAGGCACACCGATTTTCTTATCGTGAAGGAATTTTGTTTGATAAGATCAATGACGAATCGGGGTACAGCAGTTATTTTGCTTATGGACAATCAAAACTTGCTAACATTTTGCATGCAAAGGAGCTTGCAAGGCGCTTGAAGGAAGAAGGAGTGGAAATAACTGTCAACTCCCTTCATCCTGGATCAATTGTTACAAATATTTTGCGATACCATGGTTATGTTAATGCCCTTGCTAATACCGTGGGCAAGTACTTCCTTAAAAACGTTCAACAGGGAGCTGCAACTCAGTGTTACGTGGCGTTGCATCCACAAGTCAAGGGAATATCTGGTGAATACTTTATGGATTGCAATAAGGCTGAACCAACCTCTCTGGCTAAAGATTCAGAGCTGGCAAAAAAACTATGGGAACTAAGCTCAAGTCTGACTAATCCAAAGTAG 948 0.4241 MWFLGWKGASGFSASSTAEQVTEGIDGTALTAIVTGASSGLGLETTQVLASRGVHVVMAVRNVDSGKNVKETILKEIPSAKIDVMELDLSSMASVRKFAADFNSSGLSLNILINNAGVMATPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTVRECEQEGRIVILSSEAHRFSYREGILFDKINDESGYSSYFAYGQSKLANILHAKELARRLKEEGVEITVNSLHPGSIVTNILRYHGYVNALANTVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDCNKAEPTSLAKDSELAKKLWELSSSLTNPK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03302 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Phco4g03302 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Phco4g03302 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Phco4g03302 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Phco4g03302 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Phco4g03302 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Phco4g03302 315 PANTHER RETINOL DEHYDROGENASE 10 312 - -
Phco4g03302 315 CDD retinol-DH_like_SDR_c_like 31 305 - -
Phco4g03302 315 Gene3D - 26 315 - -
Phco4g03302 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03302 Phco-Chr4 53521049 53523526 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03302 4 53521049 53523526 Phco4g03302 4 53521049 53523526 ECH