Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03300 ATGTGGATAATTCACGGCCATTTTTCTTCCTATCTTGTTTGTTTGCTATACATCGTACTAATTTCTTCAGGGAGATTAAGGAAAGAAAGGAAAGGGTGTGAGAGTTTTTGGGGTGGTTGTTGCAGAGTGACAATGGAGAATAAAGAGGAAGATGTTAAGGTTGGAGCAAACAAGTTCACAGAGAGGCAGCCATTGGGTACAGCAGCACAGGGTGACAAGGACTACAAGGAGCCACCACCAGCTCCTTTGTTTGAGCCTGGTGAGCTCAAATCATGGTCCTTCTACAGGGCTGGGATTGCTGAGTTTGTGGCCACCTTCTTGTTCCTCTACATAACCATTTTAACTGTCATGGGTGTCAACAGGTCCTCTTCCAAGTGCTCCTCTGTTGGCATTCAAGGCATTGCTTGGTCCTTTGGTGGCATGATCTTTGCCCTTGTCTACTGCACTGCTGGAATTTCAGGGGGACACATCAACCCAGCTGTGACCTTTGGTCTGTTTTTGGCAAGGAAGTTGTCCCTCACAAGGGCACTGTTCTACATTATCATGCAGTGTCTTGGGGCCATCTGCGGGGCTGGTGTGGTGAAGGGCTTTGAGGGTAATGGTAGGTATGAGTTGTTCAAAGGTGGAGCAAATTTTGTGAACTCTGGATACACCAAGGGTGATGGACTTGGAGCGGAGATTGTTGGCACTTTTGTTCTTGTCTACACCGTTTTCTCAGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCCACCATTCCCATCACAGGAACTGGCATTAACCCTGCTAGGAGTCTTGGAGCTGCCATTATCTACAACAGGGACCATGCATGGGATGACCAATGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCTCTTGCTGCTTTGTATCACCAGATAGTTATCCGAGCCATTCCTTTCAAGGCAAGAGCTTAG 996 0.4759 MWIIHGHFSSYLVCLLYIVLISSGRLRKERKGCESFWGGCCRVTMENKEEDVKVGANKFTERQPLGTAAQGDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVNRSSSKCSSVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFEGNGRYELFKGGANFVNSGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDDQWIFWVGPFIGAALAALYHQIVIRAIPFKARA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03300 331 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 57 326 IPR034294 -
Phco4g03300 331 FunFam Probable aquaporin PIP1-2 81 331 - -
Phco4g03300 331 ProSitePatterns MIP family signature. 156 164 IPR022357 -
Phco4g03300 331 NCBIfam MIP family channel protein 100 318 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 Gene3D Glycerol uptake facilitator protein. 81 329 IPR023271 -
Phco4g03300 331 Pfam Major intrinsic protein 88 318 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 SUPERFAMILY Aquaporin-like 88 323 IPR023271 -
Phco4g03300 331 CDD MIP 96 321 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 PRINTS Major intrinsic protein family signature 225 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 PRINTS Major intrinsic protein family signature 301 321 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 PRINTS Major intrinsic protein family signature 261 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 PRINTS Major intrinsic protein family signature 138 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco4g03300 331 PRINTS Major intrinsic protein family signature 175 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03300 Phco-Chr4 53513071 53519106 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03300 4 53513071 53519106 Phco4g03300 4 53513071 53519106 ECH