Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03290 ATGGTTGAATCAATTGCCGCCACTTCGCTCCTTGGCCACCGTCCAATTTGTCGTGGAAATTTGGCCAGAGATGTTTCTGTTAAGCGCAAATCTTTGAATTCTTGTCGGCTGCCAGCAACTGATTTTCTTGGTGGTGGACGGATTGTGGTTTCTTTGGCTTTGCCTAAATCTGATAAGCAAGATAGGTTTATGTTTTCATCAATTAAGGCATTGGCTGTGGAGTTAACAAGAGAAGCACATGCTTATAGGGAAGAGAAATTGCCCAATAAAGATAATAACAGGATTGATAGTGGGTTTGATCAAAGGCCTGTTTCTTGGCCTCCGGCTAATAGAGCCGATAACCCCTCCCTCCGCAATCCGTTGCTCCGGCATGAGAGGATGGGGTGCGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGAGTTCTCGTTGAGGACAATTCTGATTTAGAGAAGCAGGCTTGGCTGGCACTCTCCCAGGAAGAAGGCAATTCCTCTCCTCCTGCTTTTATCCTCAAGAGAATAGAAGGCATGAAGAATGAACAGGCGATTTCAGAAGTTCTGTGTTGGTCGAGGGATCCGGTGCAATTAAGAAGAATGGCTGATAGAAAAGAAGAAATCTACCAAGCTTTGCAGGGTGGAATATATAGGTTCAGGTCTGGTTCGAAGGAGTTTGTTAGTCTTTTGATGCATTACAAGATACCAATGGCATTGGTTTCCACGCGTCCTAGAAAGGCTATTGAGTCTGCTATAGGGGAGATTGGGATTGAGGACAATTTCAGTGTCATTGTAGCAGCAGAGGATGTTCATAGGGGAAAACCTGATCCTGAAATGTTTGTTTATGCTGCACAGCTTTTGAACTTAATACCTGAGAGGTGCATTGTGTTTGGAAACTCCAATCTAACAGTCGAGGCTGCACACGAAGCTCGAATGAAATGTGTGGCTGTTGCTAGCAAGCACCCTGTCTATGAGCTTGCGGCTGCAGACTTGGTTGTCAGGCACCTAGACGAGCTTTCTGTAGTTGATTTGAAGAATCTCGCAGACATTGAAATGACTGAATTTGGGTCTCCAGAACCTGAGGTGGAGATGGAGATGGAAAAAGATTATGACCCTTCATCCGTTGATGACATATTCTGGTAA 1137 0.4512 MVESIAATSLLGHRPICRGNLARDVSVKRKSLNSCRLPATDFLGGGRIVVSLALPKSDKQDRFMFSSIKALAVELTREAHAYREEKLPNKDNNRIDSGFDQRPVSWPPANRADNPSLRNPLLRHERMGCGWLGAIFEWEGVLVEDNSDLEKQAWLALSQEEGNSSPPAFILKRIEGMKNEQAISEVLCWSRDPVQLRRMADRKEEIYQALQGGIYRFRSGSKEFVSLLMHYKIPMALVSTRPRKAIESAIGEIGIEDNFSVIVAAEDVHRGKPDPEMFVYAAQLLNLIPERCIVFGNSNLTVEAAHEARMKCVAVASKHPVYELAAADLVVRHLDELSVVDLKNLADIEMTEFGSPEPEVEMEMEKDYDPSSVDDIFW 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03290 378 NCBIfam HAD-IA family hydrolase 250 315 IPR006439 -
Phco4g03290 378 MobiDBLite consensus disorder prediction 357 378 - -
Phco4g03290 378 SUPERFAMILY HAD-like 134 337 IPR036412 -
Phco4g03290 378 Pfam Haloacid dehalogenase-like hydrolase 139 315 IPR041492 -
Phco4g03290 378 CDD HAD_BPGM-like 195 317 - -
Phco4g03290 378 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 378 - -
Phco4g03290 378 MobiDBLite consensus disorder prediction 85 113 - -
Phco4g03290 378 Gene3D Putative phosphatase; domain 2 144 217 IPR023198 -
Phco4g03290 378 Gene3D - 134 332 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03290 Phco-Chr4 53426121 53427257 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03290 4 53426121 53427257 Phco4g03290 4 53426121 53427257 ECH