Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03282 ATGCTTTCTTCTTCAACCACTCGCATCTTTATCCGCACAACAACTGCTATAAGATTAGCTTCTTCCACCTCTTCTTCTCTTCAATTTCTCTCCAATTCTACCCTCTTCCCTCCTGTTCTTCACGCTTCTTTCAAACCGCTTCCTTCAACCTCAACCACCTCTTTCTTCTCCTCCTTCAGAACAGATCACACTATGGCCACTTCTAGCGCCAAATCAGTCCACGATTTCACCGTTAAAGATGCTAAGGGAAAGGAAATTAATCTGGGCGACTACAAAGGGAAGGTCCTTATAATTGTCAACGTTGCCTCACAATGTGGCTTGACTAATTCGAATTACACAGAGCTGAGTCAGTTGTACGAGAAATACAAACAAAAAGGTTTGGAGATTCTGGCATTCCCATGCAATCAATTTGGGGCACAGGAGCCTGGATCTAATGAACAGATACAAGAGTTTGTTTGTACTCGCTTCAAGGCTGAGTTTCCTGTTTTTGACAAGGTTGATGTGAATGGTGACAAAGCTGATCCACTCTACAAATATCTAAAATCAAGCAAAGGTGGACTCTTCGGGGATAATATCAAATGGAACTTCTCCAAGTTCCTTGTTGATAAGGAGGGGAAGGTTGTTGATCGCTATGCACCCACAACTTCTCCTCTGAGCATTGAGAAGGACTTGTTGAAGTTGTTGGATGCTTGA 693 0.4286 MLSSSTTRIFIRTTTAIRLASSTSSSLQFLSNSTLFPPVLHASFKPLPSTSTTSFFSSFRTDHTMATSSAKSVHDFTVKDAKGKEINLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGSNEQIQEFVCTRFKAEFPVFDKVDVNGDKADPLYKYLKSSKGGLFGDNIKWNFSKFLVDKEGKVVDRYAPTTSPLSIEKDLLKLLDA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03282 230 ProSitePatterns Glutathione peroxidases active site. 93 108 IPR029759 -
Phco4g03282 230 CDD GSH_Peroxidase 72 224 IPR000889 GO:0004602|GO:0006979
Phco4g03282 230 SUPERFAMILY Thioredoxin-like 72 229 IPR036249 -
Phco4g03282 230 FunFam Glutathione peroxidase 64 230 - -
Phco4g03282 230 ProSitePatterns Glutathione peroxidases signature 2. 130 137 IPR029760 -
Phco4g03282 230 Gene3D Glutaredoxin 64 230 - -
Phco4g03282 230 PRINTS Glutathione peroxidase family signature 192 201 IPR000889 GO:0004602|GO:0006979
Phco4g03282 230 PRINTS Glutathione peroxidase family signature 127 143 IPR000889 GO:0004602|GO:0006979
Phco4g03282 230 PRINTS Glutathione peroxidase family signature 91 108 IPR000889 GO:0004602|GO:0006979
Phco4g03282 230 PANTHER GLUTATHIONE PEROXIDASE 63 228 IPR000889 GO:0004602|GO:0006979
Phco4g03282 230 Pfam Glutathione peroxidase 73 181 IPR000889 GO:0004602|GO:0006979
Phco4g03282 230 ProSiteProfiles Thioredoxin domain profile. 67 230 IPR013766 -
Phco4g03282 230 ProSiteProfiles Glutathione peroxidase profile. 63 230 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03282 Phco-Chr4 53368607 53370474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03282 4 53368607 53370474 Phco4g03282 4 53368607 53370474 ECH