Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03237 ATGGTTTTCATTCATGCAATGTTGAACATTCTGGTTCCCCCTCTAAGCCTGGCTATTTTGCTGCTCATTTTACCACCATATCTGTTATTCAAGATTCTCCGCTTCATCGTAAGATCAATTTTTAGAGAGAACGTAGCAGGAAAAGTGATACTTATCACTGGAGCATCGTCGGGCATAGGCGAGCACCTAGCATATGAGTATGCTAAAAGAGGGGCGCGTCTAGCACTTGTTGCCAGAAGAGAAAATCGAATCAAGGAGGTTGCTGGCAATGCCAAATTGCTTGGATCCCCAGATGTCATCACCATCCCTGCTGATGTTTCAAGACCCCAAGATTGCCAACGATTCGTTGAATCAACAATCAACCACTTTGGACGATTGGATCATTTGGTGAACAATGCCGGAATAGTTGCTCTCAGCTTGTTTGAGGACACGACTGATATCACTAAATTTGAACCCGCAATGGACATTAACTTCTGGGGTTCTGCATATGGCACTTACTTTTCAATCCCCCACCTAAGACAAAGCAAAGGCAAGATCGTAGCAGTAGCTTCTTGTGCTGGATGGTTGCCTGTTCCGAGGAAGAGTATCTACAATGCCAGCAAAGCAGCAGTGATCAGCTTATACGAGACTCTGAGAACTGAATTGGGAAGAGACATAGGAATAACTATAGTCACTCCAGGGCTGATCGACTCAGAAATGTCGCAAGGGAAGATCCTATCCAAGGATGGCAGGATGGTTTTTGATCAACAAATAAGAGATATGCAAGGTAGTGTGATGCCCATAAAATCAGTGACAGAAGCTGCCAAAGCAATTGTGAAAAGCGTTTGCCGGGGGGACTCGTACTTGACCGAACCAACTTGGTTTACGACAACGTTCTATTGGCAGATATTTTGCCCTGAAGTGTTAGAGCTTCTTAACCGCTGGTCACTAACTTCGGAGTCTTCCGAGGAGGAACCAGCTAGCAAGAAGGTCCTTGATCTTGCATTCTTAAAGAAATATATGCATCCCAAGTCAGTGAGAAGTCCCAATATCAAACCCAACTAA 1044 0.4454 MVFIHAMLNILVPPLSLAILLLILPPYLLFKILRFIVRSIFRENVAGKVILITGASSGIGEHLAYEYAKRGARLALVARRENRIKEVAGNAKLLGSPDVITIPADVSRPQDCQRFVESTINHFGRLDHLVNNAGIVALSLFEDTTDITKFEPAMDINFWGSAYGTYFSIPHLRQSKGKIVAVASCAGWLPVPRKSIYNASKAAVISLYETLRTELGRDIGITIVTPGLIDSEMSQGKILSKDGRMVFDQQIRDMQGSVMPIKSVTEAAKAIVKSVCRGDSYLTEPTWFTTTFYWQIFCPEVLELLNRWSLTSESSEEEPASKKVLDLAFLKKYMHPKSVRSPNIKPN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03237 347 Pfam short chain dehydrogenase 48 236 IPR002347 -
Phco4g03237 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Phco4g03237 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Phco4g03237 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
Phco4g03237 347 Gene3D - 35 315 - -
Phco4g03237 347 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
Phco4g03237 347 PANTHER RETINOL DEHYDROGENASE-RELATED 46 314 - -
Phco4g03237 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 305 IPR036291 -
Phco4g03237 347 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Phco4g03237 347 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Phco4g03237 347 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Phco4g03237 347 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Phco4g03237 347 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03237 Phco-Chr4 53032694 53035811 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03237 4 53032694 53035811 Phco4g03237 4 53032694 53035811 ECH