Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03236 ATGCCCGTACGCCGTCTCAGACTCGATTCCGACACCGACGAAGAAGAACAAGACCAACACCAACCCCAATCCCTACCACGACCACAGCCACAGCCAAATTTTCCGGCGATTCCTGTTGAAATCTCCGACGACGACGACTTCATCGACGTCGCCGAAAGCCTCTCTCCGCCCTCCCCTTCCTGTCCAGTCACTGACTTCCTCCAACGCCTAGGACTGTCCCTCAAGAGAGACTGGCTCGCCTCCTGTCTCCGCCAACTCCAAGCCTCCGTTACGTCCTTCGAACACCTCGACGTTGCCGCCAAAGCCAAAAGTTGTTTCGAGCAGTGCCTCTTCGCCGACATGAATTCATGCGGCGCCGGCATTCTCCCTCCCAACGTCGTTTCCATGCACCTTCGCATTCTCCCTGGTCCCTACGTTTTGCAGGTTGATGAAATAGTTAATATCACTTGTCCTCTGCGAGGAAGATATGAACAAGCACCTCCTGGACCTAAGAGGTGCCTCAAGTTGTCAATGACTGATGGTGTTCAGAGAGTCTTTGGAATGGAGTATAGGCCTATCAAAGCTCTTGAAGTCTGTGCCTCTTCTGGTTTAAAGGTTGCTATTTCTAATGTACACGTGCGTCGTGGACTTCTAATGCTGGTCCCTGAAACCATTGAAATTTTGGGGGGATTGGTTGAGGAGCTGGATGCTGCTCGAAAACGACTGGTTGAAGAAATAAACAAGCCACCTAGGGGGAAAAGAAACAAAAATGGAGAGCTCCCTCCTTTAGCAACTAGAGCAGCACTTGCTGCATGGCCTTCAGGTGGAGTTGATAATCGTGCGTGCAATGGATCCACGCTGCACAGTACTGTTTCTTTCCAAGAAAACAACCAAGGTGCAGGCCGGAGCATACCTGGCACTGTTAACAGCTTAACAACTGAAGATACTTTGTCCATGGGTGCACAAAGTGCTGCTTCTAATTCAATACCCTACATGTCTTCAAATTCCGACACCATGAATGTGGATACGCCTAGGGATAGCAATCCTGTTTCCCGTGCTAGTCCTATCGCTAACCAGCTCTCTTCTGTAATCTCAAAGGCCAAGGAGATGCACATTGATGCCGCTAATACCGGAGAATATTCTATTGACCATCAGTCTTCTAACATGGATTCAAATGTTGCAGCGACACATATTGACACGGTTAATATAACACGAGAAAGTTCTCTAGCTATTGAGTGCTCTCCTGTTCTCGAAAATGTTGAGACAGATACGGATAGAACTCCTGTTGCTACAGATACTACACATCTGCAAAGAACCTCATCCACTGTTTTAAACACTAGCGATGTCCGGATGGTTGATGCCAGTGACCATCCACTCATACTGTCTGGAGACCAAGAGGTTCCTTTCACATACATAGCTAGTTTGTCAGCCAAGTGGGCTAATATGAAGGAGGAAGCTCCTTCTGTTCAGGGTAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTCCAGTATAAGAAAAGGACAACATATGAGCTTCAGGCATATGTAGATGATGGTAGCCTTATTTCTGAAATCCTCGTCGATCATAATGTTGTAGAGAAAGGAATTGGTTATTCTCCTAAAGAGGTAACTGCGGCTCTTTCTTCTCCTGACACGAAAATTGTCCACCAAATGAAGGATACAATGCGTAAATTTCAAGCCTTTTTAGCAAACTTTGAGGGAATAATTCTTGTAGAATTCAATAAAAAATCTCCCCTTCCACTTGCCCTAGAAATGACTCAAGGCTGTCCTCAGTCTGATGCTTGGTTACTTCTGAGAAGGCTGAAGTCTCTTCACTGTCCACGAGTTCAAAACCCCGTGGATCCAATTGAATTATCCCCGTAA 1866 0.4657 MPVRRLRLDSDTDEEEQDQHQPQSLPRPQPQPNFPAIPVEISDDDDFIDVAESLSPPSPSCPVTDFLQRLGLSLKRDWLASCLRQLQASVTSFEHLDVAAKAKSCFEQCLFADMNSCGAGILPPNVVSMHLRILPGPYVLQVDEIVNITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLVEELDAARKRLVEEINKPPRGKRNKNGELPPLATRAALAAWPSGGVDNRACNGSTLHSTVSFQENNQGAGRSIPGTVNSLTTEDTLSMGAQSAASNSIPYMSSNSDTMNVDTPRDSNPVSRASPIANQLSSVISKAKEMHIDAANTGEYSIDHQSSNMDSNVAATHIDTVNITRESSLAIECSPVLENVETDTDRTPVATDTTHLQRTSSTVLNTSDVRMVDASDHPLILSGDQEVPFTYIASLSAKWANMKEEAPSVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPKEVTAALSSPDTKIVHQMKDTMRKFQAFLANFEGIILVEFNKKSPLPLALEMTQGCPQSDAWLLLRRLKSLHCPRVQNPVDPIELSP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03236 621 MobiDBLite consensus disorder prediction 1 21 - -
Phco4g03236 621 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 461 602 IPR032199 GO:0000166
Phco4g03236 621 MobiDBLite consensus disorder prediction 1 38 - -
Phco4g03236 621 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 60 604 - -
Phco4g03236 621 Pfam RecQ mediated genome instability protein 68 234 IPR013894 -
Phco4g03236 621 MobiDBLite consensus disorder prediction 326 346 - -
Phco4g03236 621 FunFam RecQ-mediated instability protein (DUF1767) 113 239 - -
Phco4g03236 621 SMART DUF1767_2 64 157 IPR033472 -
Phco4g03236 621 Gene3D - 113 239 IPR042470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03236 Phco-Chr4 53028194 53031495 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03236 4 53028194 53031495 Phco4g03236 4 53028194 53031495 ECH