Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03230 ATGGCTGTGCTATCAAATAAAATTACCTTGTGGCCGGAGAAAGTGGTGATCAATATGTCGAAAAATCCAAAAGTTTTCTTTGATATTCTAATTGGAAAGATGAAAGCTGGGCGAGTAGTGATGGAGTTGTTTGCCGATACAACCCCTAAAACAGCTGAAAATTTCAGGGCTCTCTGCACTGGGGAAAAGGGGATTGGGCAATCTGGGAAACCTTTGCACTACAAGGGGTCCGCATTTCATCGTATTATACCAGAATTTATGTGTCAGGGAGGTGATTTTACGAGAGGGAATGGGACAGGAGGAGAGTCAATCTACGGTTCCAAATTTCAAGATGAGAATTTCAAGTTGAAGCATACTGCCCCTGGTATTCTATCTATGGCTAATGCTGGACCCCATACAAACGGTTCTCAGTTCTTCATATGTACTACAAAGACCCCGTGGCTTGATGGAAAACATGTTGTATTTGGAAAAGTTGTTGATGGATACAGCGTGGTGAAGGAGATGGAGAAGGTGGGTTCTGGAAGTGGCAGGACATCGGAAACGGTAGTAATTGAAGATTGTGGGCAAATTGTAGAAAAATGA 582 0.4278 MAVLSNKITLWPEKVVINMSKNPKVFFDILIGKMKAGRVVMELFADTTPKTAENFRALCTGEKGIGQSGKPLHYKGSAFHRIIPEFMCQGGDFTRGNGTGGESIYGSKFQDENFKLKHTAPGILSMANAGPHTNGSQFFICTTKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSGSGRTSETVVIEDCGQIVEK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03230 193 PIRSF Peptidylpro_ismrse 12 193 IPR024936 GO:0003755
Phco4g03230 193 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 149 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 165 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 91 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 74 91 IPR020892 GO:0003755|GO:0006457
Phco4g03230 193 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 26 189 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 SUPERFAMILY Cyclophilin-like 17 190 IPR029000 -
Phco4g03230 193 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 190 - -
Phco4g03230 193 FunFam Peptidyl-prolyl cis-trans isomerase 19 191 - -
Phco4g03230 193 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 188 IPR002130 GO:0000413|GO:0003755
Phco4g03230 193 Gene3D - 13 193 IPR029000 -
Phco4g03230 193 CDD cyclophilin_ABH_like 23 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03230 Phco-Chr4 52963135 52963829 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03230 4 52963135 52963829 Phco4g03230 4 52963135 52963829 ECH