Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03219 ATGGCCGAGATTCAGCCGCCGGAGGGGCAAATAAACGGGGCCGGAGGAACCCTAATTCTTCATTCCTTGGAGCCCACCATCGGATCCAAACGACAGCGGCGTCCGAGCGTCCGATTGGGCGACATCGGTGGCGACCAGCCCTATGATTCCACGCGCCGCAACACAAAGCCTTGGAAACTCGCCTTCGACGGCCATCACCACCACCACCACCACCACCGCAACAAAGACAAGGACCCAGGTAAACCCTCCAAGACTCGTCCTTTAACGAACCTGAGCGAGTTTAACGAAACCCTAGAAGTCTCGAACGACCGAGAAGCGGGGAACGTGGACTCTGTTGCAATTGGCAGCTGGAAGGTTAAGGAGTCCAAGAAGAGGGGCTCTGTGGCCACCAAAAGGGTCAGATCGAATTGGGTTTCGCGAATCGAGGACGGTGGTGGGGATAATGGTGGCGGAGAAGGGGAGGGAGAGAAGTATAATAACGGGGACGAAGAAGGCGAGGACGATGATGGGTATCGGGAATTTGAGGTTGAGAATTCGGAGAGCCCTTTGAAGGAGCAAAGCCCTATTCATAGTATGGAGAATCTGGGGGTTGATGGGCATAGGAGGGTTTTTAAGGGCAGGGAAAGGGAACAACAGCATGACGGGGTTGAGCTATCTGCACCGTCTGATACTGATGTTAGGGATTGGAAGTGTGGGGATAGGAATAACGAGAATGGTGGTGGAAGGGTTAGAGGTGGTGAAGATGGGGTTAGGGTTTGGCTTAATGGACTGGGTTTAGGGAGATATGCACCCGTGTTTGAAGTGCATGAGGTGGATGATGAGATTTTGCCCATGTTGACTCTAGAGGATCTGAAAGATATGGGGATTAGTGCTGTTGGGTCCAGGAGAAAAATGTACACGGCCATTCAGAAGCTCGGGAAGGGCTTCTCCTGA 933 0.5305 MAEIQPPEGQINGAGGTLILHSLEPTIGSKRQRRPSVRLGDIGGDQPYDSTRRNTKPWKLAFDGHHHHHHHHRNKDKDPGKPSKTRPLTNLSEFNETLEVSNDREAGNVDSVAIGSWKVKESKKRGSVATKRVRSNWVSRIEDGGGDNGGGEGEGEKYNNGDEEGEDDDGYREFEVENSESPLKEQSPIHSMENLGVDGHRRVFKGREREQQHDGVELSAPSDTDVRDWKCGDRNNENGGGRVRGGEDGVRVWLNGLGLGRYAPVFEVHEVDDEILPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03219 310 CDD SAM_superfamily 250 304 - -
Phco4g03219 310 Pfam SAM domain (Sterile alpha motif) 249 305 IPR001660 GO:0005515
Phco4g03219 310 SUPERFAMILY SAM/Pointed domain 248 305 IPR013761 -
Phco4g03219 310 PANTHER SCP160 246 307 - -
Phco4g03219 310 SMART SAM_4 242 308 IPR001660 GO:0005515
Phco4g03219 310 MobiDBLite consensus disorder prediction 22 103 - -
Phco4g03219 310 Gene3D - 245 305 IPR013761 -
Phco4g03219 310 ProSiteProfiles SAM domain profile. 245 308 IPR001660 GO:0005515
Phco4g03219 310 MobiDBLite consensus disorder prediction 62 77 - -
Phco4g03219 310 MobiDBLite consensus disorder prediction 85 103 - -
Phco4g03219 310 MobiDBLite consensus disorder prediction 139 197 - -
Phco4g03219 310 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03219 Phco-Chr4 52883328 52884260 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03219 4 52883328 52884260 Phco4g03219 4 52883328 52884260 ECH