Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03213 ATGAAGAACTTGCCAACATGGAAAACCATGGCAATGACTGTGGTGTTGCTTCAATTGAGCTTTTGCTTGGAGATTTTCTGTCTCTCTAATCATGCAGATAGAATTGTTCGGCTTCCCGGGCAACCCAACACAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACCTCAAACACAAAGCTCTCTTTTACTATTTTGTTGAATCAGAAACTCATCCAGCCTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCTCTTGGAGTCGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGGGAAGTTCTGATAAAAAACGAGTACAGTTGGAACAGAGAGACAAACATGTTGTATTTGGAGGCACCAGTCGGGGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATTCAGGAACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTGGGTAATCCAGTTCTAGAATACGCCACTGACTTGAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCTGATTCAACGTACAAATTGTTTACTACAGGTTGTAATTATTCCCGGTACGTCAGTGAATACTATAGAGACTCGATTTCGCCGCTTTGTTCAAAGGTTTTGAGGCATGTAGCCAGAGAAACCAGTAGGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAAAAAATAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGAAAAGATGTACAAGAGGCTCTCCATGCCAAGCTTGTTGGAGTCCGAAAGTGGGATGTCTGCAGCAACATTTTGGACTATGATATGCTCAACCTGGAGAAACCTACACTTCCTGTTGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGAAGCCGCACCTTAGTTCAAAAGCTGGCTAGACAACTAGGACTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAGTATCCTCTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCGTTTGTTTTGTTCAAGTCATTCTTGGAGGATAGGCCTCTACCTGAAATTTTCTGA 1401 0.4297 MKNLPTWKTMAMTVVLLQLSFCLEIFCLSNHADRIVRLPGQPNTGFQQFSGYVTVDDLKHKALFYYFVESETHPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLEAPVGVGFSYAKGGSSYETVNDETTARDNLVFLQRWFNKFPQFRNRDLFLAGESYAGHYVPQLAKLMIEINKKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVLRHVARETSRFVDKYDVTLDVCISSVLSQSKAICPQGQKINESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNILDYDMLNLEKPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSFVLFKSFLEDRPLPEIF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03213 466 SUPERFAMILY alpha/beta-Hydrolases 37 463 IPR029058 -
Phco4g03213 466 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Phco4g03213 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Phco4g03213 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Phco4g03213 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Phco4g03213 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Phco4g03213 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Phco4g03213 466 Gene3D - 314 350 - -
Phco4g03213 466 Gene3D - 360 458 - -
Phco4g03213 466 FunFam Carboxypeptidase 28 463 - -
Phco4g03213 466 Pfam Serine carboxypeptidase 42 458 IPR001563 GO:0004185|GO:0006508
Phco4g03213 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 446 IPR001563 GO:0004185|GO:0006508
Phco4g03213 466 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Phco4g03213 466 FunFam Carboxypeptidase 360 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03213 Phco-Chr4 52821364 52824194 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03213 4 52821364 52824194 Phco4g03213 4 52821364 52824194 ECH