Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03212 ATGGCAAAACAGCGAAACCAGGGCAAAGGCCAAGAGAGGGAATTGGAACTCGAAAATCAAGAGTCTGAGGCTGAGATTGAGGCCCCATTGCCTCTCACTGTGACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAAGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACTGCAAAACATCGTTCATCTGGCTTCCCTCATCGCACTTCCATCACCATGACGTCTAGTTCTTGCGTTATAGAACGGTTGGAGGATCCAAAATTGGTGCTGCACCTTGATCAGACAGAAATTAGATTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGACATTGAGTCAAGCTCTTTTTCTTGGGACATGCTCTCTTCACTACACCACACTGAACACAGTAGTAGCAATGAACAATCCGAGGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGAGGAGTTGTCTTCTTTGCCTTTTTCAATTTCCCTGGGAATGCCGATACATGTCCAAAAGAAGCAGCAGCAGTTATAAAGATATCACCATCAAGAATGGCAACACAGTCTGAACGTCTTGGCTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCACAGGGTAGAGTCATTCACAATACCAGTTTTGAATGGCAACAAATAAAGGAAGCTGCAGAAAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAGGTGACATGCTTTGAACTTTTGGAAGCACTTGAGCTCAGCCGGTGTCTCTTTTTTATGAGTTATGTACACGGTTCACCCTTGCTTGAAAGCTCTACTGCATTCAAGTCGAAGGGATCTGCAGAGAGAACGTCAGAAGCTCTTGGCAGGGTGCTGTTGCTGGACCTTGTCATCAGAAATGAAGATAGGCTGCCTTGCCGTGACCTTAGATGGCGTGGGAATCCAGCAAATTTGTTGTTGGCTGGAAAGATTATCTGCGCAAATACAGATGTGCTAAAAGCCGCTGTAGATTCTGCAATTGACCGATATAGACCAAAGATGACATGGGCTCTTCAGAAAGAAAGAAGGTCAACTTCAGTAGAATGCAGACTCGATTCTCACAATCCTGGCTTGATATCACAATCCTCTGATCTTTCAGATATAGCAGAATTTCCAATATCTCTTGACATGAACCTTATAGGTCAAACATCTGGAGAATCAATGTCTACGGACATTAACATAGTAGCCATTGATTCTTGTGTTCCTCGGCGACCCCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTACCCTAAGTTGATTGAGTTGTTAATCAATAGTTCTGAATTTGCCTCAAACCTGATATATGATGTAACTGGAGGGAAATTAGGATGTCCTCCACAAGAAGACATGGATAAAACTGATATATATGCGAATGACGTAGTGTCTGTAGTTCATGCGTTCCGTACTGGTTTCCGCGCAGCTCTCAGGGATCTGCAGGGATTTCACATATTCCTACTCACACTTCACCAAAGACTTGATACTTTGTTACGACAATTTATGAACATTGTAAGTAAAATATCTTTGGGAGAATTTGACAAAGAAGATACTGTGGTTCCTGACTCACCTTCACTGGCAGCTGGGGGGCATTGTTCCTCTCCATCATGCAAGGAGAGGCCTGGTAATGATAACCATCATGATTTGATTGATTCAGAATCACAGAGAACTCCTTCAAAGGCATCATCTTCAGGCAACAGAGATTCCAGTCCTACGTCAAGAGAAACTTGCCATGGAAAGTTCTATAAAAATGGGGAACCACTTCGTAGTCTGCGTTTGACTACTATGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAGTAAAGAATTGGAACAATGGAATGAAATGCTTAAAAGTGACGCCATCAAACTATGTCAGGAGAACAATTTCAATCCAGGATTTTTTGAGGGTAGTGATAATAACTGTGTTGTTGACGCATATGAACTTAAGATTAGACTTGAGCATATTCTCGAGAGAATTGGATTGATATCAGATGCTGCAAGTACTGAGAAACCTTCAGCCGTGACAAGTAGTCTGTTTATTGGTGGAGCATTGGCTGCAAGATCTGTTTATACACTGCAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCATGATCTATTTGTGTATAAGAATTTCTCTGTATGTGACAGTGATGATTACAACATCAGCAGCATATTTGAAGAAGCATGTGATTTTATAGATTATGTTGAACAAACTGGTCAAAGAGTTTTAGTTCACTGCTTTGAGGGGAAAAGCAGAAGTGTCACATTGGTCCTCGCATACTTAATGCTCAGGAAGGAGTATACTTTATCAGAAGCATGGCAAGCTTTGAAGCGAGTTCACTGTCGAGCACAACCCAACGACGGGTTTGCAAAGATCTTATTGGAATTGGATCAGAAACTACATGGAAAGGTTTCGATGGAATGGCTTCAGCGAAAACCAATGATGAAAGTTTGCCCAATATGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTCAAGCTCCATCTGCAGAAATCACATAGAAAACTGTCCTCTGGGAGTGTAGATAGCGCCATGACTATGGAAATCCAGAAAGCTTTGACAGCTTTGAAGATTAGCCGTGGAGGGAGTGTCAGCCCCACACAAAGACAATCTCATCCAATAATTGATCAATAG 2757 0.4251 MAKQRNQGKGQERELELENQESEAEIEAPLPLTVTSRVLYMLGDITAGPAFKFTQWLQLVRKRTAKHRSSGFPHRTSITMTSSSCVIERLEDPKLVLHLDQTEIRLWERLGKAAMLDIESSSFSWDMLSSLHHTEHSSSNEQSEDEMNKALEVTVNSGGVVFFAFFNFPGNADTCPKEAAAVIKISPSRMATQSERLGYEFAKWLGVQTPQGRVIHNTSFEWQQIKEAAEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLESSTAFKSKGSAERTSEALGRVLLLDLVIRNEDRLPCRDLRWRGNPANLLLAGKIICANTDVLKAAVDSAIDRYRPKMTWALQKERRSTSVECRLDSHNPGLISQSSDLSDIAEFPISLDMNLIGQTSGESMSTDINIVAIDSCVPRRPPAGKRANDQVNYPKLIELLINSSEFASNLIYDVTGGKLGCPPQEDMDKTDIYANDVVSVVHAFRTGFRAALRDLQGFHIFLLTLHQRLDTLLRQFMNIVSKISLGEFDKEDTVVPDSPSLAAGGHCSSPSCKERPGNDNHHDLIDSESQRTPSKASSSGNRDSSPTSRETCHGKFYKNGEPLRSLRLTTMLRDFHKFAKVDAESSKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNCVVDAYELKIRLEHILERIGLISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYHDLFVYKNFSVCDSDDYNISSIFEEACDFIDYVEQTGQRVLVHCFEGKSRSVTLVLAYLMLRKEYTLSEAWQALKRVHCRAQPNDGFAKILLELDQKLHGKVSMEWLQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQSHPIIDQ 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03212 918 Gene3D Protein tyrosine phosphatase superfamily 674 843 IPR029021 -
Phco4g03212 918 MobiDBLite consensus disorder prediction 556 570 - -
Phco4g03212 918 SUPERFAMILY Protein kinase-like (PK-like) 55 431 IPR011009 -
Phco4g03212 918 SMART dsp_5 691 833 IPR020422 GO:0006470|GO:0008138
Phco4g03212 918 MobiDBLite consensus disorder prediction 1 17 - -
Phco4g03212 918 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 691 836 IPR029021 -
Phco4g03212 918 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 760 812 IPR000387 GO:0016311|GO:0016791
Phco4g03212 918 Gene3D - 271 387 IPR036940 -
Phco4g03212 918 MobiDBLite consensus disorder prediction 533 595 - -
Phco4g03212 918 Pfam Dual specificity phosphatase, catalytic domain 713 832 IPR000340 GO:0008138|GO:0016311
Phco4g03212 918 Pfam Actin-fragmin kinase, catalytic 103 371 IPR015275 -
Phco4g03212 918 MobiDBLite consensus disorder prediction 1 24 - -
Phco4g03212 918 Coils Coil 1 25 - -
Phco4g03212 918 MobiDBLite consensus disorder prediction 571 593 - -
Phco4g03212 918 FunFam Dual specificity protein phosphatase PHS1 663 837 - -
Phco4g03212 918 ProSiteProfiles Dual specificity protein phosphatase domain profile. 691 836 IPR020422 GO:0006470|GO:0008138
Phco4g03212 918 CDD DSP 692 829 - -
Phco4g03212 918 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 18 917 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03212 Phco-Chr4 52812020 52818896 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03212 4 52812020 52818896 Phco4g03212 4 52812020 52818896 ECH