Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03202 ATGAGGAGGAATTTCATTCTGTTCGGAGTCTTTTCTTTTGTCACAGTGTCTGTAAGTAACGTTCGTAGGGGCTCGGCTCTGCTTCAACCTCAACCCTTTCACGACGCCCAAAACCCTCGCTCGTCAGACTCAATGGGCAAGGAGAGCCAAGTCTCCGCTATGGATATCGACGCTCCGAAACCGGCTAGTTCCGATCAGATCGTTCCCAAATTCTCCGTTAACGTGCTGCAGCTGTTGAAATCGGCGCAAATGCAGCATGGCTTGCGCCACGGCGATTACACTCGCTATAGGAGGTATTGCACAGCTCGTTTGAGGAGGTTGTATAAATCGTTGAAGTTTACCCATGGTCGTGGCAAATATTCTAAAAGGGCCATAACTGAATCTACTGTCTCTGAAGTAAGGTTTCTTCATCTAATTTTGTATACAGCAGAGAGAGCTTGGAGTCATGCTATGGAGAAAAGGCAGCTTCCAAATGGTCCAAATGCAAGTCAACGTATATATTTGATTGGTAGGTTGCGGAAAGCAGTAAAATGGGCTACTTTGTTTTCACAATTGTGTGCGGTCAAGGCAGATTCTAGAACATCTTTGGAAGCTGAGGCATATGAATCCTATATGAAAGGGAGTTTGTTGTTTGAGCAAGATCAGAATTGGGACGTGGCTTTAAAGAACTTCAAAAGTGCTAGGGCTGTCTATGAGGAATTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGTCGTGAGCGAGTTGAGGAGCTAGAACCTAGTATCCGTTACTGCCTTCACAAAATTGGCCAGTCAAATCTACAGGCCTCTGAACTTTTACAAATTGGTGATGTGGAAGGTCCTGCATTAGACCTTTTTAAAGCCAAACTAGAGGCTGTCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTCCTTTGGTTTGGCCACAGATTTCCTATTTCAAACGCCAAAACAAGGGTTTCGATCCTGAAAGCTCAGGAGTTGGAGAAAGATATACATGGTCCATTGGCCGACTCAATTCCAGCCGACAAAAGACTAGTTATTTTTGACAAAATCTTTTCTGCATATCATGAAGCCCGAGGCTATATTCGGGCTGATTTGGCCACTACAGGAAGTGCTGAAAGTGTGAAAGATGATTTGAATGGTCTGGACAAGGCTGTCAGTGCTGTTCTCGGAGAAAGAACCATTGAACGCAACCTGTTGTTGGTTAAGGTTGCAAAAAGCAAACTTGCAAAGCGGCATGATGATAAAAATGAGAAAGTCACCAAACCTGAAGAGCTTGTTCGCTTATACGATCTCTTGCTACAGAATACAGCTGATCTATCTGATTTAGTCAGTTCTGGAAGGGATAAAAAACCAGAAGAAGTTAGCTTTGCTGAAGTGTGTTCATGCAAAAGTTTGGCTTTTCGAGCTCAGAGGTGCTTTTATGTTGCGAAGTCATACAGTGTGGCTGGGATGAGGGCTGAAGCATATGCATTGTACTGTCGTGCTCGCAATTTGGCTGATGATTCCTTAAAAAAATTGCAAATGTTAGATGGTAATAATAAGACTATGGTTAAAGAGTTGGAGGACTTGTGCAAGGAGTGCCGATCTAACAGTTGTATTGAGCATGCGTTGGGGACCATAGAGGAAAAAAAGACTCAAGAGAATCTATCTGAAAAGGTCTCCAATATATCATTGACCGGAACTGAGCGGTTGGAGAAGTTCCTTCTTGAGAAACTTGAAGTTTATGAGTCTGCTGTGGGTGATTCAAATGTGAAGTGTACACCACGCATTACAGGCTTTCCCCCATCTTTCCAGGCAATTTCCCGTAATCCTATTGTGCTGGATCTGGCTTATAACATGATTGAATTCCCAGATATTGAAAATAGGATGAAGAAGGACAGAAAAGCCAAGGGCGGCTTTATTAGTAGAATATTTGGATGA 1944 0.4326 MRRNFILFGVFSFVTVSVSNVRRGSALLQPQPFHDAQNPRSSDSMGKESQVSAMDIDAPKPASSDQIVPKFSVNVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYSKRAITESTVSEVRFLHLILYTAERAWSHAMEKRQLPNGPNASQRIYLIGRLRKAVKWATLFSQLCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKNFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLQIGDVEGPALDLFKAKLEAVMAEARSQQAASMTEFLWFGHRFPISNAKTRVSILKAQELEKDIHGPLADSIPADKRLVIFDKIFSAYHEARGYIRADLATTGSAESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRHDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFAEVCSCKSLAFRAQRCFYVAKSYSVAGMRAEAYALYCRARNLADDSLKKLQMLDGNNKTMVKELEDLCKECRSNSCIEHALGTIEEKKTQENLSEKVSNISLTGTERLEKFLLEKLEVYESAVGDSNVKCTPRITGFPPSFQAISRNPIVLDLAYNMIEFPDIENRMKKDRKAKGGFISRIFG 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03202 647 FunFam Signal recognition particle subunit SRP68 70 267 - -
Phco4g03202 647 PIRSF SRP68 71 640 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Phco4g03202 647 MobiDBLite consensus disorder prediction 29 49 - -
Phco4g03202 647 MobiDBLite consensus disorder prediction 29 52 - -
Phco4g03202 647 Gene3D - 70 266 IPR038253 GO:0003723
Phco4g03202 647 Pfam RNA-binding signal recognition particle 68 88 622 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Phco4g03202 647 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 67 646 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Phco4g03202 647 CDD SRP68-RBD 74 262 IPR034652 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03202 4 52730296 52738371 Phco4g03202 4 52730296 52738371 ECH