Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03194 ATGGGCATGTGGAAGTTGAGTTTTTTGGGGTTTCTTTCTGCCTATTTTCTCTTTACAATTGGTGCTGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTATGTATATGAACTTCCAAGTAAGTATAATAAGAAAATTCTCCAAAAAGACCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGATTTCTCTTATCTAGCCCTGTCAGAACCCTCAATCCGGAAGAGGCTGACTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAGTCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACCGCACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCTGGAAGAGAAGGCAATTGAAAGAGGGATTCTTCAACTGCTACGGCGTGCTACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATTACCATTCCTCCATACGCTCCACCACAGAAAATGCAAACCCACTTAATTCCTGACAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTTTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGAACAATCCTCTATTTGACATCTCAACTGAGCATCCAACCACGTACTACGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTGTTATTATTGCAGATGACATTGTGCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAGGAGGAGGTTCCAAACTTGGATACCATACTCACATCTATCTCACCAGAAGTCATATTAAGGAAGCAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAATCTGGAGACGCCTTCCATCAAGTTTTAAATGGACTGGCAAGGAAGCTGCCACATGACAACACCGTGTTCTTGAAACCTGGGGAGAAGTTCTTGAATTGGACTGCTGGACCTGTGGGTGACCTTAAACCTTGCAAGTTTTGGACATTCCATAATAAAATTGGCATGGCAATGGCAGTGGCAATGGCTTCAACCACTGCTTTTCCATTGCCAAGTACAAGCTTTTTCACTCCTCAAACATGGCTTCACAGTGGACCCTTTAGTTTGCGGTGTCTGGGAGGAAGAATGGAACATAACAGTAACGGGGCAAAGATCAAAAGCACTATTCTTCACCATCTCTTCCACAAGCAGAGACAGAGTCCTTACTACGACAATCTATGCCGCCCTGTTTCAGATTTGCTTCCATTCATTACCAATGGGATCAGAGGTGTCACCACCAATCCAGCGATTTTTGAGAGAGCTATTTCATCCTCAAATGCCTACAACGAACAGCTGAGGAAATTGGTAGGGGCAGGGAAAGACGTAGAGAGTGCCTATTGGGAATTGGTAGTGAAAGACATACATGATACTTGCAAACTCTTGGAGCCAATTTACAATGATTCAGATGGGGTAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTAGCAAATGATACCAGGGGGACAATTGAAGAGGCAAAATGGCTAAATAAGATGATTGGGTGTTCAAATGTTTATATCAAAATTCCTGCAACTGATGAATCCATCCTTTCTATGAAGGAGGTTATTTCTCTGGGGATAAGTGTAAATGCCACTCTCATATTTTGCCTCCAAAGATATGAAGCAGTGATTGATGCTTACTTGGATGGCCTTGAGGCTTGTGGCAGGACTGATCTCTCCAAGGTTTCAAGTGCAGCAGCATTCTACATCAGTAGAGTGGATTCTATACTTGACAAAAAACTTGAGCAAATTGGTACCTCTGAGGCTCTTGATCTCAAAGGAAAGGGTGCGATTGCTCAAGCAGTCTTAGCTTACCAACTTTATCAGAAAAAGTTTTCTGGTCCAAGATGGGAACACTTAGAGAAGAAAGGTGCAAAAAAGCAGAGGTTGATGTGGGCTTCAACAAATGTGAAAACTCCAGCTTACCTTGACACATTTTATGTTGATTCTCTTATTGGACCAGATACTATTTCAACCATACCAGACCAAGCTCTTAAGGCCTTCATGGACCATGGTATTCTTTCAAGAACTCTTGATGCAAAAGTATCAGAGGCACAAGACATTTACAATGCAATTCAGAAGTTGGGGATTGATTGGGGTTCTGTTGGATCACAACTGGAACATGAGGTGCTGGATTCCTTCACAAAAAGCTTTCACAATGTGCTTCAATGCATTCACAAGAAAACACTAAGAACAAACATGGCATTGCAGGCACCAAGTCTTCACTGCGCCCCCACCGTCAATGGTGGCCTGCGAAGACCCTCCGTCAACCCTTTTGCTCTCAAGTCCTCCTTCTTCTCTGGTTCACTCAACCTTCTTCTTCATCCCAATCACCACCACCTCACTTCAGCACCACCCAGGATTTCCATGCGCGTTGCTTCCAAACAGGCCTATATCTGTCGCGATTGCGGGTATATTTACAATGACAGGACTCCCTTTGAAAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGATTTAGGACCTATGCACCTGCTGTCAGTAAAGATGCCAATAGCACAGATGTTAGAAAGGCACGAAAAGCTGAACTAAAGAGAGATGAAGCAATTGGGAAAGCACTTCCTATTGCAGTTGTCGTGGGAATTGCAGTGCTTGCTGGATTATATTTCTATCTGAATAGCCAATACTAG 2982 0.4406 MGMWKLSFLGFLSAYFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVYVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYLEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMQTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEEVPNLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQSGDAFHQVLNGLARKLPHDNTVFLKPGEKFLNWTAGPVGDLKPCKFWTFHNKIGMAMAVAMASTTAFPLPSTSFFTPQTWLHSGPFSLRCLGGRMEHNSNGAKIKSTILHHLFHKQRQSPYYDNLCRPVSDLLPFITNGIRGVTTNPAIFERAISSSNAYNEQLRKLVGAGKDVESAYWELVVKDIHDTCKLLEPIYNDSDGVDGYVSVAVSPKLANDTRGTIEEAKWLNKMIGCSNVYIKIPATDESILSMKEVISLGISVNATLIFCLQRYEAVIDAYLDGLEACGRTDLSKVSSAAAFYISRVDSILDKKLEQIGTSEALDLKGKGAIAQAVLAYQLYQKKFSGPRWEHLEKKGAKKQRLMWASTNVKTPAYLDTFYVDSLIGPDTISTIPDQALKAFMDHGILSRTLDAKVSEAQDIYNAIQKLGIDWGSVGSQLEHEVLDSFTKSFHNVLQCIHKKTLRTNMALQAPSLHCAPTVNGGLRRPSVNPFALKSSFFSGSLNLLLHPNHHHLTSAPPRISMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRTYAPAVSKDANSTDVRKARKAELKRDEAIGKALPIAVVVGIAVLAGLYFYLNSQY 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03194 993 CDD rubredoxin 903 937 IPR024935 GO:0005506
Phco4g03194 993 Gene3D Aldolase class I 480 834 IPR013785 -
Phco4g03194 993 SUPERFAMILY Rubredoxin-like 900 942 - -
Phco4g03194 993 CDD Transaldolase_like 491 823 IPR004732 GO:0004801|GO:0005737|GO:0006098
Phco4g03194 993 Gene3D - 901 939 - -
Phco4g03194 993 Hamap Transaldolase [tal]. 486 840 IPR004732 GO:0004801|GO:0005737|GO:0006098
Phco4g03194 993 ProSiteProfiles Rubredoxin-like domain profile. 900 940 IPR024934 GO:0005506
Phco4g03194 993 Pfam Exostosin family 49 344 IPR040911 -
Phco4g03194 993 PANTHER TRANSALDOLASE 497 833 IPR001585 GO:0005975
Phco4g03194 993 NCBIfam transaldolase 504 828 IPR004732 GO:0004801|GO:0005737|GO:0006098
Phco4g03194 993 SUPERFAMILY Aldolase 487 833 - -
Phco4g03194 993 Pfam Transaldolase/Fructose-6-phosphate aldolase 508 828 IPR001585 GO:0005975
Phco4g03194 993 ProSitePatterns Transaldolase signature 1. 514 522 IPR018225 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03194 Phco-Chr4 52627202 52637925 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03194 4 52627202 52637925 Phco4g03194 4 52627202 52637925 ECH