Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03121 ATGTCTTCTGATCCAAGCTTGCTCCTGTGCCTACCCGATGATTTGTTTGCCATGGTGTCGCGGTTCCTCTTGCCCAGAGACGTGTGCAATCTCAGTCTCTGCTGCAAGAGTCTCCATGCCTGTGCATCTTCAGAAAAAGTGTGGCTCACTCAGTGTGACATGGTGGGGGTGGTGCCCCACGGGGACCTTGTTGAGTGGAGGGAGGGTGTGTCGTCTTACAAGGCTCTTTGTCGTTTCCTTTTGAGGGTTAAACCGTTGCTTGGAATATGGGTTAATCAGAACCCTGAGCTTGGCAACCTTGTCTATGTCATGCCTGGTTTTGTTTCGGTTGTCGGGTGCCGGATAATTCCTCAGGAGCTTGGTCATTTGGGGATTCAAGATGGTCCTATCCAATGGTCATCTGTGTTTGAAGTTATTGGTGATTTTGAAGGTTCAACTACCTTTTTTCTCCATGGAAGGGAAGAGGAGACAGACTATGTTCATCCTGGTTCGGTCAAATATATAGATGAGTCCTGCAATGTGCTGTTGCTTGAGATTGAAGCCAGGGTACAAGATTATGGTAGTAGTAGTAGCAGCAGTAGTAGTACTGCTTTGTTGCATGATTCGGGTGCGATGATATCAGGAAGGGTTTGTAGGTCAAACAGTGAGATCTCTAGGTTACAAAGAGAGGGTGGAAATGCTGAGGCAATAGTTCCTTTCAACAAGTTGGCTTTTAGTGATAGAAAAAAGTTGCTTGAGGTCACCATCGGCCTAGTTCGACAAGAGGTTCCTCCTGGTATGGAAGCTGGACCATTGTTTTCTGCGATGAGAGATGACTGTGACAACTTTCACAAAGATTTGGTGCTTTTGAAGGAAAGAAGAGCAATCCTTTGTGAAATGTGCAGCCTTGTTAGTAGCCGAATGGACAATGAGGAAAGCTCTAAAGGGGCAGACGGTCCATTGCAATTAGAGCAGGATGACATAAGAAAGAGTTGTAACTGGTCCAAGGACTTCTCTAATCTGTTGAACAAGGAGAATGGTCACATACAATGCACCAAGAAGAAAAGTCTTGGTGGATATTTCTGGGGTGGCTTTAAACAGATCCTTAGAAAATCTAGTTCAGTTAATGAAAGTCATGCAATTTTCGAGAAGTTTACTTCAAGACGTGAGACAAAGCATGCGCGGCTTGAAGATTTTCTTAGATCAAGTGATACAATAGGGCTAACATTAAAGGCATCAACTGTAAAATTATCTTCTTACCGTGCATGGCCAAACATGCCTGATAATTGGTTTGCACTTTTCAAGATGCCCTTACAAGTTCCCTCAGCGGACCAAATTTATGCGGGTTTGTGGGGAGGAACTTTTGCTAGGCCTCCTGGAAAACCTTCTCAAGACAAGCCGGGAAAGGCTCTATTCTTTCTTCTGCTCTCTTATGAAGAGTCCCAAGAACAAAAGCTTCTTATTGCAACAAAAATATTGGAAGGTACTCACTATGTCTTGCATCCTAATGGTTCAGCAATGTTCATAGTGGATATCAATCAGCCTTCATATGATTCCTTTCCCTGGGACTCCAATAGTGATATCACTCATGCTTTCACAGGAGAGGGTATTTCAAATGGTTATGGGTTCAGATACCCTGGATCAAAGCCCGGTTCCCTCTTTATATTTGAAAATGGTGTCCTTGCCTTTGTTTGGAAGGACACTATGTCTGTCTTGACTTTGCAAAGACTCCACTTGCAAGAACTTCTGAAGAAAGGAGAGAGAGTACCCTCGCTGCCTCCCATTAACAATTTTTCTTATTTGACAAAGTCGTACTCAAACGTGTTTACAGGCTTTCCTAGCGCTTCCACTTCCTCACCTTCACCAAGGTTTGACTTTACCCTGACATGTCAGTTTGCTTTTATATTTCAAACCCCCCCTTGCTTCATGATGTTTTATAGCTACGATATTGATAAAAGATATTCATTGTTTCATGTAGATTAA 1962 0.4337 MSSDPSLLLCLPDDLFAMVSRFLLPRDVCNLSLCCKSLHACASSEKVWLTQCDMVGVVPHGDLVEWREGVSSYKALCRFLLRVKPLLGIWVNQNPELGNLVYVMPGFVSVVGCRIIPQELGHLGIQDGPIQWSSVFEVIGDFEGSTTFFLHGREEETDYVHPGSVKYIDESCNVLLLEIEARVQDYGSSSSSSSSTALLHDSGAMISGRVCRSNSEISRLQREGGNAEAIVPFNKLAFSDRKKLLEVTIGLVRQEVPPGMEAGPLFSAMRDDCDNFHKDLVLLKERRAILCEMCSLVSSRMDNEESSKGADGPLQLEQDDIRKSCNWSKDFSNLLNKENGHIQCTKKKSLGGYFWGGFKQILRKSSSVNESHAIFEKFTSRRETKHARLEDFLRSSDTIGLTLKASTVKLSSYRAWPNMPDNWFALFKMPLQVPSADQIYAGLWGGTFARPPGKPSQDKPGKALFFLLLSYEESQEQKLLIATKILEGTHYVLHPNGSAMFIVDINQPSYDSFPWDSNSDITHAFTGEGISNGYGFRYPGSKPGSLFIFENGVLAFVWKDTMSVLTLQRLHLQELLKKGERVPSLPPINNFSYLTKSYSNVFTGFPSASTSSPSPRFDFTLTCQFAFIFQTPPCFMMFYSYDIDKRYSLFHVD 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03121 653 ProSiteProfiles F-box domain profile. 5 51 IPR001810 GO:0005515
Phco4g03121 653 PANTHER F-BOX PROTEIN FAMILY-LIKE 4 615 IPR040275 -
Phco4g03121 653 Gene3D - 2 85 - -
Phco4g03121 653 SMART fbox_2 11 51 IPR001810 GO:0005515
Phco4g03121 653 SUPERFAMILY F-box domain 3 78 IPR036047 GO:0005515
Phco4g03121 653 Pfam F-box domain 8 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03121 Phco-Chr4 52069347 52071308 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03121 4 52069347 52071308 Phco4g03121 4 52069347 52071308 ECH
Phco4g03121 4 52069347 52071308 Phco7g01771 7 18051904 18054740 PCT