Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03107 ATGCACCTTCACAAGCTTTATAGCATTCCTTCTTCCTTCGGGAATACCTTTTTTCTGGTGGGTCATCGTGTTTTGGACACAAGAGCGTGTAATGATTGTTTATGCCGCAAGAATCGGAGATGGTTCGGTGCGTCCATTTCGTGTTCGGGTGTTAGGAACGATTTCCCTTCTATTGAACAGCTTAGTGATGCACGGGTTATATACTCTGTCGCTGCATCTATGGGACACAATCAGGAGTCTCATCCAGAATCACATTTTCGAGTTCCAGCAATTGTGAACGCTCTAGAAGAAATGCAGCTCTCTTCAAAGTTCCGTGGCTCTGAGTTAATTGAACTTCAACATTTTGAGCCTGCTTCAGTAGATGATATAGCAAGCGTGCATGCAAGAGCCTATGTTACTGGACTTGAAAAGGTTATGGATCAAGCTGTGGAGAAGGGCCTTCTTTTCGTTGAAGGTTCTGGACCAACATATGCCACTGCCACTACCTTTCAGGAGTCAAAAATTGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCGGGTTCAAAGATAAAGAGTGATGCACCCACTGGTTTTGCTCTGATAAGACCGCCAGGACATCATGCTGTTCCACAAGGACCTATGGGCTTCTGCATTTTCAGCAATGTGGCCATTGCAGCCCGTCATGCTCAGCGTGTTCATGGACTGAAGCGTGTGTTTATCATTGATTTTGATGTTCATCATGGAAATGGAACAAATGATGCTTTTTATAATGATCCAGATGTATTTTTCCTTTCGTTTCATCAAGATGGAAGCTACCCAGGTACTGGTAAATTTCATGAAGTGGGAAATGGAGATGGTGAAGGAACCACATTAAATCTGCCGCTTCCTGGGGGCTCAGGCGATACTGCTATTAGAACCGTGTTCGATGAAGTTATTGTACCATGTGCTCAAAGATTTAAACCAGACATCATTCTTGTTTCTGCTGGGTATGACGGTCACGTGTTGGATCCACTCGCAAATCTTCAATATACAACTGGAACATACTACATGCTAGCGTCCGGTATTAAAGAACTAGCGAGAGATTTATGTGGGGGGCGATGTGTGTTTTTCTTGGAGGGAGGATATAATCTGAAGTCTCTGTCATATTCCGTGGCAGACACATTCCGTGCTCTTCTTGGTGATCGAAGCTTGGCATCTGAGTTTGATGACCCTAACATTTTGTACGAAGAGCCATCTACAAAAGTTAAGCAAGCAATTCAGAGGATAAAACACATTCATTCCCTTTGA 1275 0.4392 MHLHKLYSIPSSFGNTFFLVGHRVLDTRACNDCLCRKNRRWFGASISCSGVRNDFPSIEQLSDARVIYSVAASMGHNQESHPESHFRVPAIVNALEEMQLSSKFRGSELIELQHFEPASVDDIASVHARAYVTGLEKVMDQAVEKGLLFVEGSGPTYATATTFQESKIAAGAGLALVDSVVAGSKIKSDAPTGFALIRPPGHHAVPQGPMGFCIFSNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYNDPDVFFLSFHQDGSYPGTGKFHEVGNGDGEGTTLNLPLPGGSGDTAIRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASGIKELARDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDRSLASEFDDPNILYEEPSTKVKQAIQRIKHIHSL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03107 424 Gene3D Histone deacetylase domain 57 423 IPR037138 -
Phco4g03107 424 CDD HDAC_classII 81 388 - -
Phco4g03107 424 PRINTS Histone deacetylase superfamily signature 233 248 IPR000286 -
Phco4g03107 424 PRINTS Histone deacetylase superfamily signature 317 327 IPR000286 -
Phco4g03107 424 PRINTS Histone deacetylase superfamily signature 199 222 IPR000286 -
Phco4g03107 424 Pfam Histone deacetylase domain 81 386 IPR023801 -
Phco4g03107 424 SUPERFAMILY Arginase/deacetylase 76 391 IPR023696 -
Phco4g03107 424 PANTHER HISTONE DEACETYLASE 2-RELATED 58 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03107 Phco-Chr4 51975276 51981771 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03107 4 51975276 51981771 Phco4g03107 4 51975276 51981771 ECH