Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03093 ATGACGACGAGTACGGATCATACACTGAATCGGCGTCCATCAAGAAGTGCCGCAACCACGACATTTTCTATGGAGGTATTCGACAACGAAGTAGTGCCCTCCTCACTCGCCTCCATCTCGCCAATTCTCAGAGTCGCCAATGAGATACAGAGCGACCGTCCCAGGGTTGCTTATCTCTGTCGGTTCTATGCCTTTGAGAAAGCACATAGGCTGGACCAGAGTTCCAGCGGGCGTGGCGTTAGGCAGTTTAAGACCGTGTTGCTACAGCGGTTGGAGAAGGACAATCCAACTAGTCTTGCTTCTCGGGTTAAGAAGACAGATGCAAGAGAAATTCAGTCCTATTATCAGCAATACTACGAACATTATGTCCGAACTCTCGATCAGGCGGAGCAGGCAGACAGAGCTCAACTCAGCAAAGCTTACCAGACTGCTGGGGTTCTGTTTGAAGTGCTCTGTGCGGTCAATAAGACTGAGAAGGTGGAAGAAGTTGCACCTGAGATTATGGCAGCAGCAAGAGATGTCCAGGAGAAGACAGAGATTTATACGCCTTATAATATTCTTCCTCTGGATGTTGCTGGTGCTTCCGTGCCAATAATGCAATTTGAAGAGATTAAGGCTTCCGTTTCTGCACTTTGGAATACTCGTGGCTTGAACTGGCCTAATTCGTTTGAGCTACAGAGGCAGAAAACTGAAGATTTAGACTTGCTTGATTGGCTTAAAGCCATATTTGGTTTTCAGAGGGATAATGTCAGGAATCAGAGGGAGCATATGATTTTGCTTCTTGCTAACACTCATATAAGGCTACATCCTAAACCCGAGCCTTTCAACCTGCTGGATGATCGTGCTGTAGATTCAGTGATGAAAACCCTTTTTAAGAATTACAAAATGTGGTGCAAATTTCTTGGACGAAAACACAGTTTACGACTTCCTCAAGGTCAGCAAGAGACACAGCAGCGGAAGTTGCTTTATATGGGGTTGTATCTTCTTATCTGGGGCGAAGCATCCAACGTTCGCTTCATGCCTGAGTGTCTATGCTACATATTTCACAACATGGCATATGAACTCCACGGTTTGTTGGCTGGAAATGTAAGCATTGTTACTGGTGAAAATATCAAGCCTTCCTATGGTAGTGATGACGAGGCATTCCTGTGCAAGGTTATAACTCCTTTGTACCGAGTAATTGAAAAGGAAGCCAAGAAGAGCCGACATGGAAAGGCTCCACACTCAGCATGGTGCAACTACGATGATCTAAATGAGTATTTCTGGTCATCTGATTGTTTTTCTCTTGGATGGCCCATGCGTAATGATGGTGAATTCTTTAAATCAACTACTGAATTGGCTCAGGGAAGAAAGGGTGCTCCAAAAAGATTTGGACAAATTGGCAAATCAAATTTTGTTGAGACACGATCATTCTGGCACCTCTTCCGCAGCTTTGATCGCCTGTGGACATTTTTTATACTGGGTTTGCAGGTGATGCTCATTATTGCTTGGGAAGGGATTTCACTGACGAATATAATTCAGAGGGATAGTTTATATAATCTCTCTAGCATATTCATCACAGCATCCATTCTGCGCTTACTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCATCGATGGAAATGCACTGATGTGCTAAGAAATATTCTTAAAGTCTTTGTCAGTCTTTTTTGGGTTATAATTCTCCCACTCTTCTATGTTAATTCCTTCAAGGGTGCACCTGCGGGTCTGAAGCAGTTGCTTTACTTTTTCAAACAAATAAAAGGCATTCCACCATTTTACATAATGGCTGTTGTATTATATTTGCTTCCAAATTTACTGGCCGCTATTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAGACTGGCACATAGTTAGATTCTTCTTGTGGTGGTCTCAGCCAAGCATCTATGTTGGAAGAGGAATGCATGAAAGTCAATATGCTCTTCTGAAGTACACTATATTCTGGTTGTTGCTTTTGACTTGCAAATTTTTATTCAGTTTTTTTGTCCAGATTAAGCCTCTAGTTAGACCAACAAGGGAGATAATGAGCATTCAGCATGTCAATTTTGAATGGCATGAATTTTTTCCCAACGCTCCAAATAACTATGGTGCAATAATTGCACTCTGGGCTCCTGTAATTTTGGTTTATTTCATGGACACTCAAATTTGGTATGCAATCTTCTCAACATTGTACGGAGGTGCTGTTGGAGCCTTTGATCGTCTAGGAGAGATACACACTCTGCGCATGCTAAGATCCCGGTTTCTGTCGTTGCCTGGTGCATTCAATACATGCTTGGTTCCTTCTGATACAAAACAAAACGCGAGATTCTCCTTCTCAAAGAAATTCGCTGAGATTTCTGCAAACAAAAGAACTGAAGCTGCCAAATTTGCCCAATTATGGAATGAGATTATTTGTTGTTTCCGCGAGGAAGATCTCATAAGTGATAGGAAAGGACCTCAGAGTCAATCTTGCTCTCTATCCTAG 2508 0.4262 MTTSTDHTLNRRPSRSAATTTFSMEVFDNEVVPSSLASISPILRVANEIQSDRPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTVLLQRLEKDNPTSLASRVKKTDAREIQSYYQQYYEHYVRTLDQAEQADRAQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIMAAARDVQEKTEIYTPYNILPLDVAGASVPIMQFEEIKASVSALWNTRGLNWPNSFELQRQKTEDLDLLDWLKAIFGFQRDNVRNQREHMILLLANTHIRLHPKPEPFNLLDDRAVDSVMKTLFKNYKMWCKFLGRKHSLRLPQGQQETQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGSDDEAFLCKVITPLYRVIEKEAKKSRHGKAPHSAWCNYDDLNEYFWSSDCFSLGWPMRNDGEFFKSTTELAQGRKGAPKRFGQIGKSNFVETRSFWHLFRSFDRLWTFFILGLQVMLIIAWEGISLTNIIQRDSLYNLSSIFITASILRLLQSILDLILNFPGYHRWKCTDVLRNILKVFVSLFWVIILPLFYVNSFKGAPAGLKQLLYFFKQIKGIPPFYIMAVVLYLLPNLLAAILFLFPMLRRWIENSDWHIVRFFLWWSQPSIYVGRGMHESQYALLKYTIFWLLLLTCKFLFSFFVQIKPLVRPTREIMSIQHVNFEWHEFFPNAPNNYGAIIALWAPVILVYFMDTQIWYAIFSTLYGGAVGAFDRLGEIHTLRMLRSRFLSLPGAFNTCLVPSDTKQNARFSFSKKFAEISANKRTEAAKFAQLWNEIICCFREEDLISDRKGPQSQSCSLS 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03093 835 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 320 431 IPR026899 -
Phco4g03093 835 Gene3D - 24 179 IPR023175 -
Phco4g03093 835 SMART FKS1_dom1_2 318 434 IPR026899 -
Phco4g03093 835 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 100 825 - -
Phco4g03093 835 FunFam callose synthase 3 24 181 - -
Phco4g03093 835 Pfam Vta1 like 38 162 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03093 Phco-Chr4 51889731 51898502 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03093 4 51889731 51898502 Phco7g01716 7 17240342 17254720 PCT