LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco4g03056	ATGGCTTCCTCTCATGGTAATGCACACTCTGATGCTGCAAAGATGGAACAGATAATCACTGAGTTCTTTGCCAAGAGCCTTCATATAATACTCGAATCAAGGGCACCCTATGTGTCCTCTCGCAATTTCTACGGTGATCAAGTTGTTTTGTCTCCATGTTCATCGTCTTCATCTTCGTCTAGTGTGCGGCCGAGGGATAAGTGGTTCAATTTGGCGCTCCGGGAGTGCCCGGCAGCGTTGGAAAACATTGACATCTGGCGCCAGAACAATCTTGAGTGCATAGTGATTGATGTGATTTTAGTGCAGAGGCCTCTGGATTGGGACCCTGTGACCGCGAGTTTTTCTCCAAAAAGGGTTCTCCCTAGGAGTTCTTCGCTGAAGGAAAGATGCCCTTTTGGCTGGAACACTGATCAGGAAGAATTGGGGGTTGTGGGAAGAAGTGAAAAGATTGTGGAGAGGTGGGTTGTGCAGTATGAGAGTAGGAAGGCAAGGGATTCTAGTTCTGGCAGTAGGAGGTCAAGCAGTGTTTCTCTGCATAACTTGTATAAGAAATCAACTTTGCTTTTGAGGTCTTTGTATTCCACCCTTAGACTTTTACCTGCCTATAAAGTTTTCAGAGAGCTTAATTCTTCTGGACAAATTAGGGATTTTACCCTTGCTCACCGTGTGTCTTCTTTTGTTGAGCCCTTCACCCGGAAAGAAGAGGCTGAAATGACGAAATTCGGGTTCACCCCTGTGGATACTTCTTCTGGTAGGCTGTGTCTTAGTGTGATGTATTGCCCCTTAGCCTCAGGTGTGAGCTCAGAACCTTCGACTCCAATGTCCCCACAAGTTATAGCAGACTATGTTGGGAGTCCATTGGCTGATCGGTGGAGGAGGGTTCCTTCTCTTCCCGTGGCAGGCTTGCCAACTCATGTCTCCCCATCATCGTTGCCATCTTCAAGGCAGCGCAGTTTGAGTTTCGATCATTATAGAGCCTCACCTCCATCTTATTTACCTTCCCCTACTTATTCGGAATCATTCTCATCTTTGCGGCCTTACCCCCCTGCAAGTTTGCCTCCTCATCCAACTGAGATGTCTTTGATTCAAAAGAAGAATACAAATTTTGATGATTATTATCCCTCTCGATCACCTTCAACCGATAATTCAGGACCACTACCATGCAAACCACTTTTACGATCTGGAAGTGCTCCTGTCAGCATACCTGCTGAAGTTGCTAATTCCCCTGGCTACTCCAATCGTCATAATGTGCGTCCTTCTCCTCCCCTAAGAGGTTCAAGGGACACTGCTAAGATTGATAGAAGTACAAATGCTATGCAAACTGGTGCCACAGCTGAGAAGTTGTTTTCTCTTGGAAAAGATGAGTCTCGAAAATATTCTGGACTAAAGATATCAGCAAACAGCTCGCCACAAATTTCAATTTCCAGAAGCTCCAGTAGGTCTTATCAGGATGATTTTGATGATACTGATTTTACTTGTCCATTTGATGTGGATGATGATATTACGGATCCAGGAAGCAGAGCTGAATCTCTAGATCAAGGTATTTTGGCTGAGACTCTTGAAGCTGGAGGATTCTTTCCCATTAGAAAGTCTCATGATGCTGCTGTTGGTGCGCTTGTGCAAATGCTGAAGAAAGCACCACCTCTCCGTCAAGATTTCTCCACTTCACAACACCTTTCACAAGGAGTTACAAATCTTGAAACCTGGAACAATAACATTCAAGGGCCCAGTCAGATCCTAGAGGCATCAAAAGCAGTGAGCATCATGTCTTCTGGGATCATAGCCACTAGGAAAACCACAGCTGATGCACTGGAAGAGTTCCACGGTTACAAAGAGATGAAAAACCTGTTGCTTATGCGAGGTAGCAAGCACCAGATATAG	1881	0.4535	MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRAPYVSSRNFYGDQVVLSPCSSSSSSSSVRPRDKWFNLALRECPAALENIDIWRQNNLECIVIDVILVQRPLDWDPVTASFSPKRVLPRSSSLKERCPFGWNTDQEELGVVGRSEKIVERWVVQYESRKARDSSSGSRRSSSVSLHNLYKKSTLLLRSLYSTLRLLPAYKVFRELNSSGQIRDFTLAHRVSSFVEPFTRKEEAEMTKFGFTPVDTSSGRLCLSVMYCPLASGVSSEPSTPMSPQVIADYVGSPLADRWRRVPSLPVAGLPTHVSPSSLPSSRQRSLSFDHYRASPPSYLPSPTYSESFSSLRPYPPASLPPHPTEMSLIQKKNTNFDDYYPSRSPSTDNSGPLPCKPLLRSGSAPVSIPAEVANSPGYSNRHNVRPSPPLRGSRDTAKIDRSTNAMQTGATAEKLFSLGKDESRKYSGLKISANSSPQISISRSSSRSYQDDFDDTDFTCPFDVDDDITDPGSRAESLDQGILAETLEAGGFFPIRKSHDAAVGALVQMLKKAPPLRQDFSTSQHLSQGVTNLETWNNNIQGPSQILEASKAVSIMSSGIIATRKTTADALEEFHGYKEMKNLLLMRGSKHQI	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco4g03056	626	MobiDBLite	consensus disorder prediction	335	449	-	-
	Phco4g03056	626	Pfam	Autophagy-related protein 13	19	259	IPR018731	GO:0006914\|GO:1990316
	Phco4g03056	626	MobiDBLite	consensus disorder prediction	360	384	-	-
	Phco4g03056	626	FunFam	Autophagy-related protein 13b	13	265	-	-
	Phco4g03056	626	Gene3D	HORMA domain	11	263	IPR036570	-
	Phco4g03056	626	PANTHER	UNCHARACTERIZED	3	623	IPR040182	GO:0000045

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco4g03056	Phco-Chr4	51540712	51545222	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco4g03056	4	51540712	51545222	Phco4g03056	4	51540712	51545222	ECH