Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02890 ATGAATAGGTGCTGGTCCTGCACTTTGCTCCTCAATTTTCTCTCTGCGCTAACAATATTGTTCTCTGGAGGCATAGTTGAAGTTAGGCCCGTGGCAGTGACGGGTCTTCCACTTCGCACGGATTCCCGATGGATCGTGGGCCAAGATGGGCAAAGGGTGAAGCTGGCGTGTGTGAATTGGGTTTCCCACTTGGAAGTTGTGGTGGCGGAAGGGCTCAGCAAAAAGCCCGTGGATGCCATTTCGAAGGGAATAAAGTCCATGGGCTTCAACTGTGTCAGGCTCACTTGGCCCATACTTTTGGTGACAAACGACTCTCTAGCTTCTCTCACCGTTAGACGCTCCTTTCAGAACCTCGGCCTCCTTGAATCCGTCGCCGGTGTCCAAACCAACAACCCGTCCATCATCGACCTTCCCCTCATCCAAGCTTTTCAGGTAGTGGTGAAAAGTCTTGGAGATAACGATGTGATGGTGATATTGGACAACCACATAACCCAACCGGGATGGTGTTGCAGTAATTCTGACGGTAATGGGTTTTTCGGTGACAAATATTTTGACCCAAATTTGTGGATGTTGGGTCTCACCAAGATGGCCACACTTTTCAATGGGGTCACTAATGTGGTGGGTATGAGCTTGAGGAATGAGCTCCGAGGACCCAAACAGAATGTGGAAGATTGGTACAAGTACATGGTGAAAGGAGCAGAAACAATCCATGCAGCAAATCCAGATGTTCTTGTGATTCTATCCGGCCTAAATTTTGACAAGGACTTGTCATTCATTAAAAAACAACCAGTGAACCTGACATTTAAGGAAAAAATGGTATTTGAGGCTCATTGGTATGGTTTTACTGATGGTGAAGCTTGGGTGAATGGGAACCCAAACCAAGTATGTGGACAAGTGGCTGGAAATGTGATGAGAACCTCTGGCTTCTTGGTGAACCAAGGATGGCCACTATTTATTAGTGAGTTTGGTGTAGAGTTAAGAGGCACCAACGTGAACGACAATCGCTACCTTAGCTGCTTCTTAACCGTGGCAGCTGAGCATGACTTGGACTGGGCCTTGTGGACACTCGTGGGAAGCTACTACTTTAGACAAGGAGTTGTAGGAATGGAAGAGTTTTATGGGATTCTTAATTGGGATTGGAACCAAGTTAGGAATCTCAGTTTCTTAAATAGAATCTCTTCCCTCCAACTTCCATTTCGAGGTCCTGGAATAACAAAAGGCAATCCATACAAATTGATATACCATCCCTTAACGGGTCTGTGTGTCATAAGAAAGACATTACTAGAGCCATTAACATTAGGTCCTTGCAATTTATCTGATGGTTGGAAATACACACCCCAAAAAATTCTATCAATAAAGGGTACTTACTTCTGCATTCATGCGGAGAATGAAGGGATGGCTGCCACACTTGGGATAACATGCTCAGATTCTAACTCTAGATGGGAAATGATCTCAGATTCCAAGTTGCACCTTTCCTCTAAACTTAGTGATGGTTCTGATGTATGCCTAGATGTAGATGACAACAACATCATCGTAACCAATGCATGTAAATGCTTGAGCAGAGATCATACATGCGACCCTAGTAGCCAGTGGTTCAAACTTATTGACAGTGGAAGGAGGTCAAGCTTCACAACCTCATCATCATCCTTGCTGAATTCATCGGACCTTTTATCTAAACCATTGAGCTCAGTATAA 1695 0.4484 MNRCWSCTLLLNFLSALTILFSGGIVEVRPVAVTGLPLRTDSRWIVGQDGQRVKLACVNWVSHLEVVVAEGLSKKPVDAISKGIKSMGFNCVRLTWPILLVTNDSLASLTVRRSFQNLGLLESVAGVQTNNPSIIDLPLIQAFQVVVKSLGDNDVMVILDNHITQPGWCCSNSDGNGFFGDKYFDPNLWMLGLTKMATLFNGVTNVVGMSLRNELRGPKQNVEDWYKYMVKGAETIHAANPDVLVILSGLNFDKDLSFIKKQPVNLTFKEKMVFEAHWYGFTDGEAWVNGNPNQVCGQVAGNVMRTSGFLVNQGWPLFISEFGVELRGTNVNDNRYLSCFLTVAAEHDLDWALWTLVGSYYFRQGVVGMEEFYGILNWDWNQVRNLSFLNRISSLQLPFRGPGITKGNPYKLIYHPLTGLCVIRKTLLEPLTLGPCNLSDGWKYTPQKILSIKGTYFCIHAENEGMAATLGITCSDSNSRWEMISDSKLHLSSKLSDGSDVCLDVDDNNIIVTNACKCLSRDHTCDPSSQWFKLIDSGRRSSFTTSSSSLLNSSDLLSKPLSSV 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02890 564 Gene3D Glycosidases 36 396 - -
Phco4g02890 564 Pfam Cellulase (glycosyl hydrolase family 5) 76 356 IPR001547 GO:0004553|GO:0071704
Phco4g02890 564 SUPERFAMILY (Trans)glycosidases 37 385 IPR017853 -
Phco4g02890 564 SUPERFAMILY Ricin B-like lectins 407 534 IPR035992 -
Phco4g02890 564 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 21 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02890 Phco-Chr4 50104187 50106984 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02890 4 50104187 50106984 Phco4g02890 4 50104187 50106984 ECH