Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02888 ATGGCAATGGTGCCTCGGAAGATGCAATCCAGGGCTACCCGCCATATCTTTTCAGCATCAGATGACACTACAATGACCCAAAATGTTCGAGCCACCCATGCTCCAGATGGTCGACACGTTGAAGTTAGACCTCTTTTAAATGTCGTTGAAGACATACTTCATCGCGTTGCCTCTCTCATCCCTGACATTGTTCAGGGAAAACCAGTGCAAACGGGTGCCATGGAGGACAGTAACCACCAATCTGATCTAGCCGAGGTGCTAGATATTTCGTACCACACAATCAACCAAATTTCTTGCGAGATATGTTGCAAGTGTTCGAGTGGTGATGGACATGCCACGACCATGGGAATACTGAGCATGCTCTCAGGCTATTCATGGGATGCCAAGGTGGTAATAGCGTTAGCAGCTTTTGCAGCCAACTTTGGGGAGTTTTGGCTGGTGGCTCAGCTTTACGCCACTAACCGTCTTGCTAAGTCTGTTGCAAAGTTGAAGCACATCCATGAAACACTTGAACAAGTGGATGATTTGGGACTAAAGTTCGAAACAATCAATAACCTTTTCAAGGCAATGTTGGATGTAACCAATTACATTGTTCAATTCCATGAACTTCCCTCTCGGTACATTCACCCTGAGGCACCAGAGATCTTGACTGCCTCCACTCTTTTCCCCGGTGCTGTCTATTGGATCATTCGGAGTATTCTGTTCTGTGCGTCGCATTTTTTAGACATAACTGGCTTGGTTCATGGATATATGACAACAATAACAGAAAGTTGGGAGCTTTCCAGTTTGGCCCATAAGCTTGATAACCTAAATGGCCACCTTCGCAAGCAACTCACCCTTTGTCATCTGCATTTAGATAACAACAAACAGAGAGAAACATATGAAACACTTCGGCTCCTTTTTGAGACGTCCCACCAAGATAATTTGAAGGCCCTCAAAGCTATGCTTTGCAGTAACGATGATCCGTTGCCATTGTTCGATGGTTCTTCCAAACAAAGGGTTAGCATTGAGGTATTGAGGAGGAAAATTGTTCTACTCTACATATCAGACCTACAGAATGTCTCTGATCAAGAGCTTGTGATTTTTGAACAAATGTACATAGAGTCACGTCAGGACTCAACCAGGTTAGAGAGTCAATATGAACTAGTTTGGATTCCAGTTGTGGACAAAGCAATCCCATGGACTGAATTGAAACCAAAGTTTGATATGCTGAAATCAACAATGTCATGGTACTCAGTTTATGACCCAACTGTTCTGGAGCCTGCAACCATCAGGTACATTAAAGAGGTGTGGCTTTTCAAAGCGAAGCCTATACTTGTTGTGTTGGATCCCCTAGGGAAGGTTGTTAATCTGAATGCATTACCCATGATGTGGATTTGGGGAAGCTTGGCTTATCCGTTCTCTATCTCAAAGGAGGAAGCATTGTGGAATAATGAAAAATGGGGAATTGTACTATTGGCAGATTCAATCGATCCATCGCTTTCGTATTGGATATCAGAAGGCAAATATATATGCTTGTACGGAGGGGACGATATGGACTGGATCCGCAAATTCACAGGAACTGCATATGCGCTGGCAGCAGCTCTGCAACTACCACTAGAGATGATTTATGTGGGGAAAAGCAATCCAGGGAAGAAAGTTCAAGAAATCACCAACGCCATACAAGCAGAAAAATTGAGCACCGTGCTCCCTGACCTTGCGATTATTTGGTTTTTCTGGGTTAGGTTAGAGAGCATGTGGCACTCCAAATCACAGCATAGCAAGACAGTAGAGAATGACCACATAATGCATGAAGTAATGAGAATCCTAACCTATGATAGTGGTGACCCTGGATGGGCCATAATTAGTGAAGGCGCCGGAAGTATGGCACAGGGTAAGGGAGATGCATTTCTAAGGTGCCTTAATGAACATGAGCAGTGGAAAGACACAGCAAAAGATATAGGAATCTTGCCAGCAATGGCTGATTATATACAAGGACTACAGACCCCTCACCACTGCAACCGATTGACACTTCCAGGAAGCAGTGGGGGGATCCCAGACAGAGTAGTCTGTGCTGAATGTGGCAAAACAATGGAGAAGTTCTACATGTATCGCTGCTGTAACGAGTAA 2109 0.4433 MAMVPRKMQSRATRHIFSASDDTTMTQNVRATHAPDGRHVEVRPLLNVVEDILHRVASLIPDIVQGKPVQTGAMEDSNHQSDLAEVLDISYHTINQISCEICCKCSSGDGHATTMGILSMLSGYSWDAKVVIALAAFAANFGEFWLVAQLYATNRLAKSVAKLKHIHETLEQVDDLGLKFETINNLFKAMLDVTNYIVQFHELPSRYIHPEAPEILTASTLFPGAVYWIIRSILFCASHFLDITGLVHGYMTTITESWELSSLAHKLDNLNGHLRKQLTLCHLHLDNNKQRETYETLRLLFETSHQDNLKALKAMLCSNDDPLPLFDGSSKQRVSIEVLRRKIVLLYISDLQNVSDQELVIFEQMYIESRQDSTRLESQYELVWIPVVDKAIPWTELKPKFDMLKSTMSWYSVYDPTVLEPATIRYIKEVWLFKAKPILVVLDPLGKVVNLNALPMMWIWGSLAYPFSISKEEALWNNEKWGIVLLADSIDPSLSYWISEGKYICLYGGDDMDWIRKFTGTAYALAAALQLPLEMIYVGKSNPGKKVQEITNAIQAEKLSTVLPDLAIIWFFWVRLESMWHSKSQHSKTVENDHIMHEVMRILTYDSGDPGWAIISEGAGSMAQGKGDAFLRCLNEHEQWKDTAKDIGILPAMADYIQGLQTPHHCNRLTLPGSSGGIPDRVVCAECGKTMEKFYMYRCCNE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02888 702 Pfam Sieve element occlusion N-terminus 20 305 IPR027942 -
Phco4g02888 702 Pfam Sieve element occlusion C-terminus 470 701 IPR027944 -
Phco4g02888 702 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 8 701 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02888 Phco-Chr4 50090630 50094036 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02888 4 50090630 50094036 Phco4g02888 4 50090630 50094036 ECH
Phco4g02888 4 50090630 50094036 Phco2g02920 2 58215113 58219272 PCT