Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02683 ATGGATTCGGTGCCTTCGAATTCACATGGAAACCTCGATGAACAGATTTCTCAGCTCATGCAGTGCAAACCCTTGTCCGAGCAAGAGGTAAGGGTCTTGTGTGATAAGGCAAAAGAGATTTTGATGGAAGAGAGCAATGTCCAGCCTGTGAAAAGTCCTGTTACAATTTGTGGTGATATTCATGGGCAATTCCATGATCTTGCAGAGCTTTTTCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTACGTTGACCGTGGCTATTATTCTGTCGAAACTGTTACGCTTTTGGTTGCCCTTAAAGTGCGTTATCGCCAACGTATTACCATTCTGAGGGGAAATCATGAAAGTCGCCAGATTACTCAAGTTTATGGGTTTTATGATGAGTGCCTGCGGAAGTATGGTACTGCTAATGTTTGGAAGATCTTTACCGATTTGTTTGACTACTTTCCATTGACAGCACTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGATTGTCTCCTTCTATTGAAACCCTCGATAACATACGTAATTTTGATCGCGTACAAGAAGTTCCTCATGAGGGACCCATGTGTGATCTTCTATGGTCCGATCCGGATGATCGTTGTGGTTGGGGCATCTCTCCTAGAGGTGCTGGATATACCTTTGGGCAGGACATATCTGAGCAATTTAATCATACCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATGATCAAAAGGTGGTTACTATATTTAGCGCACCTAACTATTGTTATCGTTGTGGGAACATGGCATCAATTCTCGAGGTTGATGACTGCAAAGGACACACATTCATTCAGTTTGAACCGGCCCCAAGGAGGGGAGAGCCAGATGTAACCAGGAGAACGCCTGATTACTTCCTATGA 936 0.4338 MDSVPSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGTANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02683 311 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 11 311 IPR047129 GO:0004722
Phco4g02683 311 SUPERFAMILY Metallo-dependent phosphatases 10 296 IPR029052 -
Phco4g02683 311 Pfam Calcineurin-like phosphoesterase 53 244 IPR004843 GO:0016787
Phco4g02683 311 ProSitePatterns Serine/threonine specific protein phosphatases signature. 116 121 IPR006186 GO:0016787
Phco4g02683 311 Gene3D - 5 311 IPR029052 -
Phco4g02683 311 FunFam Serine/threonine-protein phosphatase 5 311 - -
Phco4g02683 311 SMART pp2a_7 25 295 IPR006186 GO:0016787
Phco4g02683 311 CDD MPP_PP2A_PP4_PP6 11 295 - -
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 257 273 IPR006186 GO:0016787
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 53 80 IPR006186 GO:0016787
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 115 139 IPR006186 GO:0016787
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 235 255 IPR006186 GO:0016787
Phco4g02683 311 PRINTS Serine/threonine phosphatase family signature 82 109 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02683 Phco-Chr4 48200700 48208461 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02683 4 48200700 48208461 Phco4g02683 4 48200700 48208461 ECH
Phco2g01635 2 46647984 46650382 Phco4g02683 4 48200700 48208461 ECH
Phco6g00212 6 2107589 2110966 Phco4g02683 4 48200700 48208461 ECH