Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02672 ATGGCCATTCCCTACCCCCATTTCATCGCCACCGAGAAGGCCGCCATGGACGCCGGTCTCCTCCTCCCTTCCTCCCCCTCCGTCATCCTCACCCAAGATGACCTCAAGAAGATCGCCGCCTACAAGGCCGTAGAGTATGTCGAATCCGGCATGGTCCTCGGCCTCGGCACTGGCTCCACCGCCAAGCACGCCGTGGACCGCATCGGCGAACTTCTCCACCAGGGCAAACTCAAAGACATTGTGGGAATCCCCACCTCCAAGAAAACCCACGAGCAGGCACTCTCCCTTGGCATCCCCCTGTCCGATCTCAACTCCCATCCCGTCGTCGATCTGGCCATCGACGGTGCCGACGAGGTTGACCCTTTTCTCAACCTTGTCAAGGGTCGCGGAGGCTCCCTCCTTAGGGAGAAGATGGTGGAGAGCGCGTGCAAGAAGTTTATTGTTATTGTTGACGAGTCCAAGCTCGTGAAATATTTAGGGGGAAGTGGATTGGCCATGCCCGTTGAGGTTATTCAGTTTTCTTGGAGGTTCACTGCTGAGAGGTTGCGCAGGCTGTTTGAGGACGCTGGGTGTGTTGCCAAGCTTAGGACTTTTGGGGAGAAGGAGGAGCCCTTTGTCACGGACAATGGGAACTTCATTGTGGATTTGTATTTCGACAGGAGTATTGGGGATTTGAAGGCTGCCAGTGAAGCAATTCTGCACCTTGCTGGGGTGGTGGAGCATGGCATGTTTCTGGATATGGCTACTGCTGTTATTGTGGCAGGGGAACTCGGGTTGACGATGAAGATTAAGTAG 795 0.5522 MAIPYPHFIATEKAAMDAGLLLPSSPSVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLHQGKLKDIVGIPTSKKTHEQALSLGIPLSDLNSHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVESACKKFIVIVDESKLVKYLGGSGLAMPVEVIQFSWRFTAERLRRLFEDAGCVAKLRTFGEKEEPFVTDNGNFIVDLYFDRSIGDLKAASEAILHLAGVVEHGMFLDMATAVIVAGELGLTMKIK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02672 264 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 164 245 - -
Phco4g02672 264 SUPERFAMILY NagB/RpiA/CoA transferase-like 31 215 IPR037171 -
Phco4g02672 264 Gene3D - 35 256 - -
Phco4g02672 264 CDD RPI_A 35 255 IPR004788 GO:0004751|GO:0009052
Phco4g02672 264 Gene3D - 158 242 - -
Phco4g02672 264 FunFam Ribose-5-phosphate isomerase A 35 170 - -
Phco4g02672 264 Hamap Ribose-5-phosphate isomerase A [rpiA]. 32 262 IPR020672 GO:0004751|GO:0009052
Phco4g02672 264 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 81 256 IPR004788 GO:0004751|GO:0009052
Phco4g02672 264 NCBIfam ribose 5-phosphate isomerase A 35 258 IPR004788 GO:0004751|GO:0009052
Phco4g02672 264 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 23 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02672 Phco-Chr4 48140508 48141302 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02672 4 48140508 48141302 Phco4g02672 4 48140508 48141302 ECH
Phco4g02672 4 48140508 48141302 Phco11g00528 11 3631781 3634035 PCT