Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02457 ATGGTACGTGCTTGTTTTCATGTAACATTAACACTCTTGCTTCTTGTAATACATGCAGCTTCATTAGAATTCAACTATCAGCAACTTGGTCACACCGGAAACTTCTTCAACACATCGGGAGATGTTAAACCTCAAGGAGGACTCCTCAAACTCACCAACAATGAACCACGTAGTTATGGTAGAGTCATATATCCAAAACTATTGCATCTTTGGGACAAAAACTCAGGGAAAGTCACGGATTTCGCTACCCATTTCTCCTTTACCATCAACGCCCCAAATGAAACCCATCATGCAGATGGCCTCACCTTCTTTCTGGCACGTCCAGACTTTCCATCGCCTGATCCAAGAGATGGAGCTGGTATTGGTCTTGCGAGCCGTGAACAACTGCTAAAGCCAAATTACACAAAGGAACATCCATTTGTGGCTGTGGAATTTGATACCTATGTTAATGAATGGGATCCTGAGTATCCCCATGTGGGTATCAGTGTAAATTCAATCGGTCAATCTGACACTGCACAGTGGTCTCCTAGCTTGGAAGAGAGAGTATATAATGCTGATATTAGTTTCAATTCCAGTTCAAACAAGTTAAGTGTCATCTTCACTGGGTATAAGGCTAACGTCGTAATTAAAGGGAACTTATCCTCTGTGGTGAATCTGAGAGATATCTTACCTGATTGGGTTGAATTTGGCTTTTCTGCAGCAACAGGAAATTATTACGAAGAACATGCTCTTAGCTCATGGTCCTTCAACTCTAGTTTTGACATGGAACAACAAAAGGGTGGAAGCAAAAGAGGGTTGGTGATAGGGCTGAGCGTTGGACTTGGTGTAGGTGTTTTAATTGTTATTTTGGGGGTGACTTTTCTTGTGAGACGGATGCTGAGGACTAGAGATTACCTTCTGAGGCCTACAATTAGGCAAGCTGTTCAAGTCCTTAGTTTTGAAGTGCCACTGCCTACACTGACACCACCGGTGCCATTCTTTACCAATAACACATCATTCAGCTCAATGGCCTCTGTGACTCCTCCTTTTGCAAATAGCCAACCTGTCTTTTCACAATCCAGTTCAACTCTTGAAGTCATTTCTCCAGGAGCTGCATATTTACATACCTACTAA 1113 0.4259 MVRACFHVTLTLLLLVIHAASLEFNYQQLGHTGNFFNTSGDVKPQGGLLKLTNNEPRSYGRVIYPKLLHLWDKNSGKVTDFATHFSFTINAPNETHHADGLTFFLARPDFPSPDPRDGAGIGLASREQLLKPNYTKEHPFVAVEFDTYVNEWDPEYPHVGISVNSIGQSDTAQWSPSLEERVYNADISFNSSSNKLSVIFTGYKANVVIKGNLSSVVNLRDILPDWVEFGFSAATGNYYEEHALSSWSFNSSFDMEQQKGGSKRGLVIGLSVGLGVGVLIVILGVTFLVRRMLRTRDYLLRPTIRQAVQVLSFEVPLPTLTPPVPFFTNNTSFSSMASVTPPFANSQPVFSQSSSTLEVISPGAAYLHTY 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02457 370 Pfam Legume lectin domain 21 259 IPR001220 GO:0030246
Phco4g02457 370 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 11 259 - -
Phco4g02457 370 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 253 IPR013320 -
Phco4g02457 370 CDD lectin_legume_LecRK_Arcelin_ConA 22 253 IPR001220 GO:0030246
Phco4g02457 370 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Phco4g02457 370 Gene3D - 19 270 - -
Phco4g02457 370 ProSitePatterns Legume lectins alpha-chain signature. 223 232 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02457 Phco-Chr4 45714568 45718046 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02457 4 45714568 45718046 Phco4g02457 4 45714568 45718046 ECH