Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02452 ATGTCTTCTCTCTGGTTTCTTAAACTCATCCTCAAATGCCTTGATCATTGTGCATGGCCTCTTCTTGCTTTGGGGTATCCTTTATGTGCTTCTGTACAAGCAATTGAGACCGATTCCTACAAAGAAACTAAGGATTTGATATCATATTGGATACTCCTCTCGCTACTATACCTATTTGAGTATGCTTTTTTTAGGCTTCTTCAATGGTTCCAGTTCTGGCCTTACACTAAGCTAATGATCATCCTCTGGCTCATCCTACCAGACTTTGAACGAGCTTCTTATGCCTACAATAATATTATTCGCAAATGCATCTCCTCAAATCCACAAGCAGCCATACGTGGTTTAAATAACTGGAGGAAGTTTTTTGTCAAGAAAGATAACTTTTTACTGCATGCAGAGAGATATGTAGAAGAGAATGGAGCAGAAGCCTTAATGAAGCTCATTGCTAGCAAGGTAAACATCTATATTGCTAACACGACTTGCAAACCTGTCGCAGAAGCCACAAATGCAAGTAGAGTTACTGACTATGAAGAAATGCAAAAGACAAATGAGAAAAATCTCCAAACAGAGCGCAAAGCCACCAAAGATTTGGAGGTGATAGAAAAAAAAGAAATTTCTAGAGGCAATCAAGATATTCCTGTGGTGCCTAAACTTGTGCAAAGTCAGAATGCTTCACCAACCTTGTTGGAAACTAAAGGAGTAATGATGAAAGACAAGGCTGATGGAGAGCCTCCTCAGATTTTTATACATAAGGAAGTTCAGAAGGAGTGGACTTGCGCTTTATGCCAGGTAACAACAACGAGCGAGAAAACCTTGAATGAACACCTGAAAGGGAGCAAACACAGGGCTAAGGAGAATGATATGAAGGCAAAGATTCAACCTGTTTCACAGAAGCTGAAAAGTAATCATTCCAAAGAGGAAATGAAACAGAAGAACATCAACCATGAGCTAAATTCCAAGACCAAGAATGGAGAGAAACTGCAAAAGAAACCTGCTGGGACGAATATTTCGGAATTAAAATGTGAAGTCTGTAATCTGAAATGCCCTAACGAGATGGCTTTGGCCTCTCACAGATATGGGAAGAAGCATTTGGCTAAAATTGCAAGTTTAAATCTGAAGTGTGTGAATAACAGGTAA 1137 0.3949 MSSLWFLKLILKCLDHCAWPLLALGYPLCASVQAIETDSYKETKDLISYWILLSLLYLFEYAFFRLLQWFQFWPYTKLMIILWLILPDFERASYAYNNIIRKCISSNPQAAIRGLNNWRKFFVKKDNFLLHAERYVEENGAEALMKLIASKVNIYIANTTCKPVAEATNASRVTDYEEMQKTNEKNLQTERKATKDLEVIEKKEISRGNQDIPVVPKLVQSQNASPTLLETKGVMMKDKADGEPPQIFIHKEVQKEWTCALCQVTTTSEKTLNEHLKGSKHRAKENDMKAKIQPVSQKLKSNHSKEEMKQKNINHELNSKTKNGEKLQKKPAGTNISELKCEVCNLKCPNEMALASHRYGKKHLAKIASLNLKCVNNR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02452 378 PANTHER HVA22-LIKE PROTEINS 10 139 IPR004345 -
Phco4g02452 378 MobiDBLite consensus disorder prediction 300 327 - -
Phco4g02452 378 Gene3D Classic Zinc Finger 236 287 - -
Phco4g02452 378 SMART ZnF_U1_5 336 370 IPR003604 GO:0003676|GO:0008270
Phco4g02452 378 SMART ZnF_U1_5 254 288 IPR003604 GO:0003676|GO:0008270
Phco4g02452 378 MobiDBLite consensus disorder prediction 273 291 - -
Phco4g02452 378 SUPERFAMILY beta-beta-alpha zinc fingers 329 368 IPR036236 -
Phco4g02452 378 Pfam Zinc-finger of C2H2 type 257 281 - -
Phco4g02452 378 Pfam Zinc-finger of C2H2 type 340 363 - -
Phco4g02452 378 SUPERFAMILY beta-beta-alpha zinc fingers 244 289 IPR036236 -
Phco4g02452 378 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
Phco4g02452 378 Gene3D Classic Zinc Finger 321 373 - -
Phco4g02452 378 SMART c2h2final6 257 281 IPR013087 -
Phco4g02452 378 SMART c2h2final6 339 363 IPR013087 -
Phco4g02452 378 MobiDBLite consensus disorder prediction 273 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02452 Phco-Chr4 45690590 45693452 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02452 4 45690590 45693452 Phco4g02452 4 45690590 45693452 ECH