LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco4g02389	ATGGCGAACCCTAAACCCAAGAGTCCCCATTCGCTGGGTGGCGAGGACGATCCCGAATCCTACGAATCGCGGTGGGTTTTCCAGGAGGACGAGGAAGCCTCCGAGATCGATGACTTCGACGCCGCCGATTTGCGCCACCAGCCTATGTTTGATTCCGAGGACGAGGACAATGCGGAGCAGAGACTCGTTCGCACCGGTCCGCGAATCGATTCGTTTGATGTCGAAGCTCTCGAGGTTCCCGGCGCTCAGAGAAACGACTACGAGGATGTCAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGATGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCTATTAATGGAAATGAAGATATTCTTGGAGCTTTATCACTTGTTTTGTACACTTTAATCTTGATTCCTTTACTGAAGTATGTCCTTGTTGTTCTTTGGGCCAATGATGACGGGGAAGGTGGTACGTTTGCATTGTACTCGTTGATTTGTCGAAATGCTAAGGTGAGTCTACTTCCCAATCAGTTGCCATCAGATGCCCGAATATCGGGCTTTAGACTAAAGGTGCCATCTCCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTAGAGACTTCGCTGGCTCTCAAGAAGATTCTACTATTAGTAGTTCTTGCTGGTATTTCCATGGTGATAGCTAATGGGGTGGTTACACCAGCAATGTCAGTACTATCATCTGTTAATGGATTGAAGGTTGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTATTGCTTTGTTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATACAACCTTGTTAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTGAAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTTTGTGCAACTGGCTCTGAGGCTATGTTTGCAGATCTTTGCTATTTCCCTGTACGGTCAGTTCAGCTTACATTTGTATTTGTTGTTTTACCGTGCCTACTGCTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAATCATGCTGATGCTGGCAATGCCTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACTTTCCTCATTGCAAACATTGCTGCATTAATTGCTAGTCGGGCTATGACAACAGCCACCTTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGACAGATTTATATCCCTGTCATAAACTGGTTTCTGTTGGCTGTTTCTTTGGTGTTTGTCTGTACTATATCCAGCGTTGATGAGATTGGAAATGCATATGGAATTGCTGAGCTGGGAGTGATGATGATGACAACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATTCGCATCATTGTAGTGCTGAGTTTTGCAGTAGTCTTCCTGGGACTGGAGTTGACTTTCTTCTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATCATATTGGTCTTTGCTGTATTGATGTTTTTTATAATGTTTGTATGGAATTATGGGAGCAAGCTCAAGTATGAAACTGAAGTGAAGCAAAAACTGTCAATGGATTTGATGCGAGATTTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATCGGTTTGCTCTATAATGAGCTGGTGAAAGGAATTCCAGGCATTTTCGGCCATTTTCTAACCACGCTTCCAGCAATACACTCTATGATTATATTTGTGAGTATTAAGTATGTTCCAGTTCCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGTCAGAGAAGCTATCATATATTTCGTTGCATTGCCAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTGCTGATGGAGAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCACTTGGCGTTCCTCTTCTGGCTGATTTTATTGATACAAACATACCCGTACCAAATTTTGAAGCAAGCACATCTGAGGATGCAAACCCTGAATCTCCTAAGCCCCCAGTGGTTGATGCTGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTTGGTCATGGGGATATAAGGGCTAGGAAAGACTCGTGGTTTATCAAGAAGCTAATTATAAATTATTTTTATTCTTTTCTGAGAAAGAACTGCCGAAGGGGGATCACGAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTGA	2541	0.4294	MANPKPKSPHSLGGEDDPESYESRWVFQEDEEASEIDDFDAADLRHQPMFDSEDEDNAEQRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLPSDARISGFRLKVPSPELERSLKIKERLETSLALKKILLLVVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLIALFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFERNSTKAWYSLGGCLLCATGSEAMFADLCYFPVRSVQLTFVFVVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSVDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIRIIVVLSFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVLMFFIMFVWNYGSKLKYETEVKQKLSMDLMRDLGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGSRVLIAPNGSVYSLGVPLLADFIDTNIPVPNFEASTSEDANPESPKPPVVDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco4g02389	846	MobiDBLite	consensus disorder prediction	10	30	-	-
	Phco4g02389	846	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	94	844	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco4g02389	846	MobiDBLite	consensus disorder prediction	1	59	-	-
	Phco4g02389	846	Pfam	K+ potassium transporter	99	672	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco4g02389	846	NCBIfam	potassium uptake protein	98	846	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco4g02389	846	MobiDBLite	consensus disorder prediction	39	59	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco4g02389	Phco-Chr4	45007942	45015578	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco4g02389	4	45007942	45015578	Phco4g02389	4	45007942	45015578	ECH
	Phco4g02389	4	45007942	45015578	Phco11g00179	11	1164769	1169976	PCT