Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02166 ATGTTGACCTCTGCATCTTCCTCCATCTTCTCCTTCATCCCCAACCTAAGGCCCTCACATTCTTCTCGCTTCACCGTCCGGGCTCACGCCAAATCCCCCACTCTCCCCAACCTCAAAGCCCTCGCCGGCGCCGCAGTGTTCGCCGCCGTTGCGCTCCAATTCCCCTCCGCACGCGCCTCACCTCCGCCCCCTCTCCAGACCGAACAACGCCTTGAAGAATCCCTCTCGCCGCTCTCAGACATCCTCGAAACGAACGCCGAGGCCCTCGCCGCTCTCAAGTCCCTCCTCCAGCAGAAGCTCGAGCTCGGCGAGGACGACGAGGCTCTCGCCATCCTCAAGCGCCTAATCGCCGCGCAGCCGGACGCCGTCGACTGGAAGTTCCTCGCAGCGCGCCTCGCGTCCGAGACTGGCGACGCCGACGCCGCGCGCGCGTACTACGAGGAAGTTCTGGCGGCGAACCCGCTCTCGTTCGAGGCGCTGTTCGAGAACGCGCTGCTGCTGGACCGGTCAGGGGAAGGGGAGGCGGCTATGCGGCGGCTGGAGGAGGCACTGCGCGTGGCCGAGGAGGACAACATGAAGAAGGAGGCGAGGGATGTGAGGCTCATCATGGCGCAGATAATGTTTCTGCAGAAGAATGTGGATGAAGCGTTAGGGATTTATGATCAGCTCACGAAAGAGGATTCGAGGGATTTCAGACCTTACTTTTGCAGAGGCATGATTTATAGCTTGCTTGATAAGAACGACGAGGCGAAGGAGCAGTTTGCAAAATACAGAGAGTTGAGTCCCAAGAAATTTGAGGTGGATGGGTATTTGAGAACCCCTTTGTCAAGGATGAAGCTGTTTAGCACCGATGAGAGCTGA 861 0.5912 MLTSASSSIFSFIPNLRPSHSSRFTVRAHAKSPTLPNLKALAGAAVFAAVALQFPSARASPPPPLQTEQRLEESLSPLSDILETNAEALAALKSLLQQKLELGEDDEALAILKRLIAAQPDAVDWKFLAARLASETGDADAARAYYEEVLAANPLSFEALFENALLLDRSGEGEAAMRRLEEALRVAEEDNMKKEARDVRLIMAQIMFLQKNVDEALGIYDQLTKEDSRDFRPYFCRGMIYSLLDKNDEAKEQFAKYRELSPKKFEVDGYLRTPLSRMKLFSTDES 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02166 286 ProSiteProfiles TPR repeat profile. 231 264 IPR019734 GO:0005515
Phco4g02166 286 Pfam Tetratricopeptide repeat 104 154 - -
Phco4g02166 286 Pfam Tetratricopeptide repeat 198 226 IPR019734 GO:0005515
Phco4g02166 286 Coils Coil 206 226 - -
Phco4g02166 286 Gene3D Tetratricopeptide repeat domain 49 277 IPR011990 GO:0005515
Phco4g02166 286 SUPERFAMILY TPR-like 86 264 IPR011990 GO:0005515
Phco4g02166 286 PANTHER TRANSMEMBRANE PROTEIN 96 265 - -
Phco4g02166 286 Coils Coil 177 197 - -
Phco4g02166 286 Pfam Tetratricopeptide repeat 234 263 IPR019734 GO:0005515
Phco4g02166 286 SMART tpr_5 231 264 IPR019734 GO:0005515
Phco4g02166 286 SMART tpr_5 123 156 IPR019734 GO:0005515
Phco4g02166 286 SMART tpr_5 157 190 IPR019734 GO:0005515
Phco4g02166 286 SMART tpr_5 197 230 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02166 Phco-Chr4 42353412 42354272 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02166 4 42353412 42354272 Phco4g02166 4 42353412 42354272 ECH