Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02162 ATGTTGCTTTTTGTGCGCAACATCCGTGGCATGGCCTCACTGCGAGTAAGCTCCTCCTGTTCATCATCCCTTCAAAACCCTTTTCCCCTTTTCTTCACTCCTTCATTCCCCTCCTCTAAAAATTCAATTTTTGCTCGCCCTATGATTTGGTTCACCAGCTTTCTGTGTGTTATGAGATACCCATTTGTCTCTAAATCTTCATTTGATGACATTGCTTCCGAATCAATGCGTAGTTTCTTGCTACAGGACGGTCCCCACATGTTTGATTCGGCATTGGCACCCGTTTGGGTGTCTATAGTTTTGGTGAAGCTGAAAGGGGACCCAAAATCAGCCCTTAAGTTCTTCAAGGAGGCAGGGGCTCGACCCCAGTTTCGCCATGCCGCGGAGTCTTATTGCGTTTTGGCTCACATTTTGTTTTGTGGGAGGTTTTATCTTGATGCAAGAAATGTAATTAGGGAATGGATTTTGTTGGGGAGGGAGTTTCCGGGGGTTGACTTCTTTGATATGTTGTGGTCTACGAGGAATGTTTGTAGGCCTGGGTTTGGAGTGTTTGATACTTTGTTTAGTGTTTTAGTGGATTTAGGTATGCTTGACGAGGCTAGGCAATGCTTTTGGAAGATGAACAAGTTTAGGGTTCTGCCAAAAGTGAGGTCTTGTAATGAGCTTCTTCACAGGCTTTCAAAATCAGACAAAGGGAAATTGGCATTAAGTTTTTTCAAGGACATGGTTGCGGCTGGCCTCTGTCCTTCGGTTTTTACGTATAATACAGTGATAGGCTGTTTGGCCAGAGAAGGGGACTTAGAAATTGCTAGTAGTTTGTTTGAAGAAATGAAAGGTATAGGTCTTGTGCCAGACATTGTTACTTATAATTCTCTCATTGATGGTTATGGAAAGGTAGGGCTATTAACCAAAGCAGTTATTGTATTAGAGGAAATGAAAGATGCAGGATGTGAACCAGATGTGATAACATACAATTCTCTTATTAATTGTTTTTGTAGATTTGAAAGAATTCCTCAAGCTTTTAACTATCTGCATGAGATGAAGCAAAGACGGTTGCAGCCAAATGTTGTAACTTATAGTACACTAATTGATGCATTTTGCAAGGCAGGCATGATACTGGAAGCAAATAAATTTTTTGTTGACATGATACGGGTGGATCTTCGACCCAATGAGTTTACATATACCTCTCTGATTGATGCAAATTGTAAAATAGGCGATCTCAATGAAGCGTTTAAACTGGCAAGTAAGATGCAGCAGGCTGGGGTGAACTTAAATATTGTCACCTACACTGCATTACTTGATGGTCTTTGTGAAGATGGAAGAATGAAAGAAGCAGAAGAATTATTTGGGGCATTGTTGAAAACTGGATGGACTCTTAATCAGCAGATTTATACTTCCCTTTTCCACGGATATATCAAGGCTACTATGATGGAGAAAGCCATGTATATCTTAGAGGAAATGAACAAGAAAAACCTCAAACCAGATGTGTTGTTGTATGGAACTAAAATATGGGGCCTTTGCAAACAAAATAACATAGAAGAATCTGAGGTTGTAATTCGTGAAATGATGGATTGTGGTCTGACTGCAAATAGTTATATATATACAATCCTTATGGATGCATATTTTAAGGTTGGGAAAACCACTGAGGCTGTTAATCTATTACAGAAGATGCTAGAATTAGGTATCAAGACCACAGTAGTAACATATGGTGTACTAATTGATGGTTTATGCAAAAAAGGTTTAGTTCAACAGGCTCTTAGTTACTTTGAGCACATGACTCTAACTGGTTTGCAACCTAATATTATGATTTATACATCTCTGATTGATGGTCTCTGTAAAAGTGATTGTGTTGAAGAAGCCAAGGAGTTGTTCAATGAGATGCTGGATAAGGGAATCAGTCCAGATAAATTAGTTTACACTTCTTTGATTGATGCGAATATGAAGCATGGAAATCCTGAAGAAGCTTTGAGTTTGCGAAATAAAATGGTTGAAATAGGTATGGAGCTAGACCTGCATGCGTATACTTCACTTATTTGGGGTTTTTCTCGTTATGGTCAACTACAACAGGCAAAGTCATTCCTAAATGAGATGCTCGGCAAAGGCATTATTCCTGATCAAGTTCTCTGTATTTATCTATTGAGAAAGTATCATGAACTAGGAAACATCAATGAAGCTCTGACACTTCATGATGATATGATGAGGAGGGGCCTAATTTCCAGGACTATTGACATAACAGTTCCTTCTGTACACTGTTGA 2256 0.3927 MLLFVRNIRGMASLRVSSSCSSSLQNPFPLFFTPSFPSSKNSIFARPMIWFTSFLCVMRYPFVSKSSFDDIASESMRSFLLQDGPHMFDSALAPVWVSIVLVKLKGDPKSALKFFKEAGARPQFRHAAESYCVLAHILFCGRFYLDARNVIREWILLGREFPGVDFFDMLWSTRNVCRPGFGVFDTLFSVLVDLGMLDEARQCFWKMNKFRVLPKVRSCNELLHRLSKSDKGKLALSFFKDMVAAGLCPSVFTYNTVIGCLAREGDLEIASSLFEEMKGIGLVPDIVTYNSLIDGYGKVGLLTKAVIVLEEMKDAGCEPDVITYNSLINCFCRFERIPQAFNYLHEMKQRRLQPNVVTYSTLIDAFCKAGMILEANKFFVDMIRVDLRPNEFTYTSLIDANCKIGDLNEAFKLASKMQQAGVNLNIVTYTALLDGLCEDGRMKEAEELFGALLKTGWTLNQQIYTSLFHGYIKATMMEKAMYILEEMNKKNLKPDVLLYGTKIWGLCKQNNIEESEVVIREMMDCGLTANSYIYTILMDAYFKVGKTTEAVNLLQKMLELGIKTTVVTYGVLIDGLCKKGLVQQALSYFEHMTLTGLQPNIMIYTSLIDGLCKSDCVEEAKELFNEMLDKGISPDKLVYTSLIDANMKHGNPEEALSLRNKMVEIGMELDLHAYTSLIWGFSRYGQLQQAKSFLNEMLGKGIIPDQVLCIYLLRKYHELGNINEALTLHDDMMRRGLISRTIDITVPSVHC 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Phco4g02162 751 Pfam Pentatricopeptide repeat domain 459 499 IPR002885 -
Phco4g02162 751 Pfam Pentatricopeptide repeat domain 239 298 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 673 705 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 252 285 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 322 356 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 532 563 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 287 321 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 603 635 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 567 600 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 357 391 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 427 460 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 463 496 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 392 425 IPR002885 -
Phco4g02162 751 NCBIfam pentatricopeptide repeat 218 251 IPR002885 -
Phco4g02162 751 SUPERFAMILY HCP-like 529 728 - -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Phco4g02162 751 SUPERFAMILY TPR-like 319 560 IPR011990 GO:0005515
Phco4g02162 751 PANTHER OS03G0856100 PROTEIN 100 471 - -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 249 IPR002885 -
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 386 454 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 98 244 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 525 594 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 245 313 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 595 663 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 664 735 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 314 385 IPR011990 GO:0005515
Phco4g02162 751 Gene3D Tetratricopeptide repeat domain 455 524 IPR011990 GO:0005515
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 565 599 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Phco4g02162 751 Pfam PPR repeat family 319 368 IPR002885 -
Phco4g02162 751 Pfam PPR repeat family 530 578 IPR002885 -
Phco4g02162 751 Pfam PPR repeat family 599 645 IPR002885 -
Phco4g02162 751 Pfam PPR repeat family 396 437 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 635 669 IPR002885 -
Phco4g02162 751 FunFam Pentatricopeptide repeat-containing protein At1g74850, chloroplastic 230 332 - -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 530 564 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 425 459 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 670 704 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 600 634 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 705 739 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 250 284 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Phco4g02162 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Phco4g02162 751 Pfam PPR repeat 184 210 IPR002885 -
Phco4g02162 751 Pfam PPR repeat 673 702 IPR002885 -
Phco4g02162 751 Pfam PPR repeat 503 527 IPR002885 -
Phco4g02162 751 Pfam PPR repeat 712 737 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02162 4 42319682 42321937 Phco4g02162 4 42319682 42321937 ECH