Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02135 ATGAGGGCGTGGAAGAGAGCCGCTGGAGCCATAAAAGACCAGAACAGCATATGGGTTGCAAAGTTCGCGCGAAAGAGTGCGTTCCACAACCCTAAGTTAGAAACTGTGGTGATCAAGGCCACAAGCCATGACGATCAACGCATAGATTCTAAGAACGTGCAGAGAGTGTTCCAATGGTTACGAACCTCGCCCTTGTACCTGAAACCTCTTGTGTGGTCTCTCTCCATGCGCATGCAAAAGACTCGAAGTTGGGTTGTCGCGCTGAAAGGCCTGATGCTCATCCACGGCGTTTTCTGCTGTGACATCCCTGTGGTGCAACGCATAGGGAGGTTACCCTTTGACCTCTCAAACTTTTCTGATGGTCATATGAGCAGTGCAAAGGCTTGGAGCTACAACGATTTCGTTCGTGCTTATTTTGCTTATTTGGATCACAGATCGTCGTTTGTATCCTCCGAGGTTAAAAGACTAAAGAAGAATAACAATAACAAGGAGATGGAGATGGAGGACACGTTGATGGAAGAGCTTGAGTGTTTGCAAAAGTTGCAAGGGTTGATTGATATGCTTCTTCAGATCAGACCTCGGAATGAGAACATGAATGTTGGTTTGGTTCTTGAAGCCATGGATTGTGTTATAGTTGAGGTTTTCGGTGTGTATAGTTTGTTTTGCAACAAGATTGCCAAGGTTTTGTTGAGGATATATGAAATGGGTGGGAGGATGGAAGCGAGCATTGGCCTCAAGGTTCTTCAGAAAGCATCGATTCAAAGGGAGGAGTTGTCTTTGTTCTTTGAGTTTTGCAAGGATATTGGTGTCCTCAATGCCTCTCAGTGCCCCAAAATTGATAGAATTTCTCGGGAAGATATTAAAGATCTTGAGAGGATAATCAATGGTGCCTCTTCGAAGAAGGGTGGTGTTGTGGCAAATGATGAGGACAAGGCCATTGTGGTAAGAGGCTGTTCTGCCATTGCGCCTGTTTCACACCAGAAGGAGTCAGAGAAAGCTTTGATGACCGTCATCACTGATCAATGGGAGGTTTTTGATGATGATGTAATGGTTGGTGCTAAAGGAATGCATACTGTCTCTGGTGAAAAGAATATTCCCAACACAACCAACCCTTTTGAGGAATCATATATCATGGTGCCTTATGTTCCTGCTCACAATCAACCTCTTCCTGATCTAATTAGTTTTTAG 1188 0.4461 MRAWKRAAGAIKDQNSIWVAKFARKSAFHNPKLETVVIKATSHDDQRIDSKNVQRVFQWLRTSPLYLKPLVWSLSMRMQKTRSWVVALKGLMLIHGVFCCDIPVVQRIGRLPFDLSNFSDGHMSSAKAWSYNDFVRAYFAYLDHRSSFVSSEVKRLKKNNNNKEMEMEDTLMEELECLQKLQGLIDMLLQIRPRNENMNVGLVLEAMDCVIVEVFGVYSLFCNKIAKVLLRIYEMGGRMEASIGLKVLQKASIQREELSLFFEFCKDIGVLNASQCPKIDRISREDIKDLERIINGASSKKGGVVANDEDKAIVVRGCSAIAPVSHQKESEKALMTVITDQWEVFDDDVMVGAKGMHTVSGEKNIPNTTNPFEESYIMVPYVPAHNQPLPDLISF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02135 395 Gene3D - 4 152 IPR008942 -
Phco4g02135 395 FunFam Putative clathrin assembly protein 7 153 - -
Phco4g02135 395 CDD ANTH_N_AP180_plant 33 148 - -
Phco4g02135 395 Coils Coil 153 173 - -
Phco4g02135 395 Gene3D ANTH domain 153 310 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Phco4g02135 395 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 319 IPR045192 GO:0048268|GO:0072583
Phco4g02135 395 FunFam Putative clathrin assembly protein 158 311 - -
Phco4g02135 395 Pfam ANTH domain 33 295 IPR011417 GO:0005543
Phco4g02135 395 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Phco4g02135 395 SUPERFAMILY ENTH/VHS domain 33 149 IPR008942 -
Phco4g02135 395 SUPERFAMILY GAT-like domain 173 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02135 Phco-Chr4 41844417 41845604 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02135 4 41844417 41845604 Phco4g02135 4 41844417 41845604 ECH