Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02125 ATGGGTACGCTTCAGTCTTGGAGGAGAGCCTACGGTGCGATCAAGGACACCACCAAAGTGGGTCTTGCCCATGTCAATAGCGATTACGCGGATTTGGACGTTGCCATAGTCAAAGCTACGAACCACGTCGAGTGTCCCCCCAAAGAGAGGCACCTCAGAAAGATTCTGTTTGCCACGTCTGCTGTTCGACCAAGGGCCGATGTTGCTTACTGTATTCACGCCCTTTCCCGGCGGTTGGCAAAGACGCGAAATTGGACGGTGGCATTGAAAACACTGATAGTCATCCATAGGTTATTGAGGGAGGGTGATCCTACTTTTAGAGAAGAACTTCTGAATTTCTCACAAAGAGGACGGATTCTCCAACTTTCAAATTTCAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCCTGGGTACGTACTTATGCACTATTTTTAGAAGAAAGACTTGAATGTTTTCGGATTCTGAAGTATGATATTGAAGCTGAGCGTCTACCCAAACCTGCCCAAGGGCAGGAGAAGGGGTACAGCAAGACCAGGGATTTGGATAGTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAGCAGCTGTTGCATCGTCTTGTTGGTTGCCGGCCAGAGGGAGCAGCTGTTAGCAATTACGTGATACAATATGCTTTGGCTCTGGTACTGAAAGAGAGCTTCAAGATTTATTGTGCTATTAATGATGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAGACACGAAGCTATCAAAGCGCTTGAAGCTTACAAACGTGCAGGTCAACAGGCAGCAAGTCTATCTGATTTCTATGATGTTTGCAAAGGGTTGGAACTTGCTAGGAATTTTCAGTTTCCTGCCTTAAGAGAGCCTCCACAATCTTTTCTTACAACCATGGAAGAGTACATTAAGGAGGCACCACGAGTGGTTACAGTTCCAAGTGAACCATTGCTACAATTGACTTACAGACCAGAAGTTCTTGCAATTGAAGATACCAAACCATCTGTTGAAGAACAGGAGCCACCAGTTCCTGTTGATAATAATGTTGTCTCTGATTCTGAACCCGCACCTCCTCCACCTCCACCATCTCATAACAATTTTGAAACTGGAGACCTGCTGGGACTGAATGACAATGCACCTGATGCATCACTCATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTCCCCACTGAAACCGGCACTACATCAGCTTTTAACTCAACTTATGCTCAAACAAAAGATTTTGATCCAACTGGATGGGAGCTTGCCCTGGTCAGCACTCCAAGTACTGATATTTCTGCAGCAAATGAGAGACAATTGGCTGGTGGATTGGACTCTCTCACTCTTAATAGCTTATACGATGAAGCGGCATACAGATCTTCTCAACAACCACTATACGGAGCACCAGCCCCAAATCCATTTGAAGTGCAGGATCCATTTGCTTTATCAAGCAGCGTCCCTCCCCCTCCCGCCGTCCAAATGGCAGCAATGCACCATCAAGCAAATCCTTTTGGACCTTACCAACCATTTCAGCCTCAGACACAGCCACCACAGCAGCAGCAGCATATGTTGATGAACCCAGCAAATCCCTTTGGGGATGCAGGATTTGGAGCATTTCCTCCCAATCCTGTTTCTCACCCACAGAACAATCCATTTGGAAGCACAGGCTTGCTATAA 1692 0.4634 MGTLQSWRRAYGAIKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILFATSAVRPRADVAYCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPAQGQEKGYSKTRDLDSEELLEQLPALQQLLHRLVGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEAYKRAGQQAASLSDFYDVCKGLELARNFQFPALREPPQSFLTTMEEYIKEAPRVVTVPSEPLLQLTYRPEVLAIEDTKPSVEEQEPPVPVDNNVVSDSEPAPPPPPPSHNNFETGDLLGLNDNAPDASLIEERNALALAIVPTETGTTSAFNSTYAQTKDFDPTGWELALVSTPSTDISAANERQLAGGLDSLTLNSLYDEAAYRSSQQPLYGAPAPNPFEVQDPFALSSSVPPPPAVQMAAMHHQANPFGPYQPFQPQTQPPQQQQHMLMNPANPFGDAGFGAFPPNPVSHPQNNPFGSTGLL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02125 563 SMART enth_2 30 161 IPR013809 -
Phco4g02125 563 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Phco4g02125 563 FunFam Clathrin assembly protein AP180 6 161 - -
Phco4g02125 563 Gene3D ANTH domain 173 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Phco4g02125 563 SUPERFAMILY GAT-like domain 179 309 - -
Phco4g02125 563 MobiDBLite consensus disorder prediction 337 378 - -
Phco4g02125 563 FunFam Putative clathrin assembly protein 173 321 - -
Phco4g02125 563 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Phco4g02125 563 MobiDBLite consensus disorder prediction 507 563 - -
Phco4g02125 563 CDD ANTH_N 32 154 - -
Phco4g02125 563 Gene3D - 7 161 IPR008942 -
Phco4g02125 563 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 504 IPR045192 GO:0048268|GO:0072583
Phco4g02125 563 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02125 Phco-Chr4 41753786 41760878 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02125 4 41753786 41760878 Phco4g02125 4 41753786 41760878 ECH