Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02106 ATGCATCTGTCATGTGTTCAGAGGTTACTAGAGATAACATTGATAACATGTTTTGATCGTTTCCTTTTTCTTCATATAGAGTGGTCAGGGATGGCTCCTTTCGCAATTACAACAACATTGGGTACTTCTCACACCTGCCACCTACCAAAGCCTGTAAACTTGAAGTTTCCAATTCGCTGCTCCGCTGCTGCTTCTTCTCCTTCTACTGTTTCCATTCGATCAAAAGCTTCTGATTTTGATTTGAGGACATATTGGGCTTCCCTAATGGTGCAGATCAATCAGAAGCTCGACGAAGCCATTCCAATTCAGTTTCCTCCTCAGATATATGAAGCTATGAGGTATTCAGTCCTTGCCAAAGGTGTCAAGCGAGCCCCACCTGTTATGTGCATCTCTGCATGTGAACTCTTTGGGGGCAGCCGCCTTGCCGCCTTCCCTACTGCCTGTGCCCTTGAAATGGTTCATGCAGCTTCATTGATACATGATGATCTTCCCTGCATGGATGACTCCCCCTCACGCCGTGGGAAACCTTCAAACCACACCATCTATGGTGTTGACATGGCAATTCTTGCTGGTGATGCGCTCTTTCCCCTTGGATTTCGTCACATTGTTTCACAGACTCCCTCCGACCTTGTGCCTGAGCCCAATCTCCTTCGTGTGATTGCTGAGATGGCTCGCTCTGTAGGCTCCACTGGTATGGCTGCAGGGCAGTTCCTGGACCTTGAAGGAGGACCCAATGCAGTTGAATTTATACAGGAAAAAAAGTTTGGTGAAATGGGAGAGTGTTCTGCAGTGTGTGGAGGATTGTTGGCTGGTGCTGACGATGATGAGATAGAGAGACTGAGAAGGTACGGGAGAGCTGTTGGGGTATTGTATGCAGTTGTGGATGATATTCAGGAAGAGAGATTGAAAGCTGAGGGAGGTGGTGACGGGAAAAACAAGGGGAAGAATTATACAGAGCTTAACGGAGTAGAAAAGGCAACAGAAAAAGCTGAAGAGCTCAGAGAAAAGGCTAAGGCAGAATTAGATGGATTTGAGAAGTACGGGGAGCGAGTCTTTCCTCTCTATAGTTTTGTGGATTATGCATTTGATAGAAGCTTCAATGTTGTTGACGACGCCAGGTGA 1122 0.467 MHLSCVQRLLEITLITCFDRFLFLHIEWSGMAPFAITTTLGTSHTCHLPKPVNLKFPIRCSAAASSPSTVSIRSKASDFDLRTYWASLMVQINQKLDEAIPIQFPPQIYEAMRYSVLAKGVKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGKPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPEPNLLRVIAEMARSVGSTGMAAGQFLDLEGGPNAVEFIQEKKFGEMGECSAVCGGLLAGADDDEIERLRRYGRAVGVLYAVVDDIQEERLKAEGGGDGKNKGKNYTELNGVEKATEKAEELREKAKAELDGFEKYGERVFPLYSFVDYAFDRSFNVVDDAR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02106 373 CDD Trans_IPPS_HT 105 297 IPR000092 GO:0008299
Phco4g02106 373 SFLD Isoprenoid Synthase Type I 109 352 - -
Phco4g02106 373 ProSitePatterns Polyprenyl synthases signature 1. 158 174 IPR033749 -
Phco4g02106 373 Gene3D Farnesyl Diphosphate Synthase 78 373 IPR008949 -
Phco4g02106 373 FunFam Geranylgeranyl diphosphate synthase 78 366 - -
Phco4g02106 373 SUPERFAMILY Terpenoid synthases 83 344 IPR008949 -
Phco4g02106 373 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 44 364 - -
Phco4g02106 373 Pfam Polyprenyl synthetase 107 299 IPR000092 GO:0008299
Phco4g02106 373 Coils Coil 320 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02106 Phco-Chr4 41477997 41481350 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02106 4 41477997 41481350 Phco4g02106 4 41477997 41481350 ECH