LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco4g02032	ATGACCGGAAGTGGAAGAACCACCGTTCGTAACAGAGCGAATTCCCTCTCTGACGCCGATTCTCGTCGAGAAAGGAGACCTCTGTTGAATCGCCACAGAGAGCGAAGCAAATACGGAAGCACCATTCCGATATTCAATACTGCCAATCTCAAACTAGTGCTCGGTATATGCTTCGTGGGATTCTTCACCATCTTCTTTATGATCCGCCACCTAATGAATTCCGTCACGGAACCGAAGCTGCCTCGCGCGGTTACGCCATTTCCCGCGCCAAAGATAATGGACCTTCCTCAGTTTCAAGGCGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGGCCTCACACGTATTTTGGGATTCGTGCCAGGACTCCCAAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAGGATGGCAGATATCACTTGCGGCATGTTTGCAGACATGAGGATGACCTAAGTACTTATGGTTGGACAAAGCACAATGGACGTGATTTTGGAAATCAAGTACTGGTTGACCATGGCATGACCTTTACTACCAGGTTCTTAAAATCAAAAGTCGAAGGCAGTGGTTATGGAGGGGATTGGGCAGTTCGAATTAATGTGGAAATTGACAAATCTCTGTGGAATGAGGAATTTGGGAGAGGTGCTCAGCTCTTCTTCTATTTGGCTGATGAAGCTGGTAATGCTCTAGATGTAAGTAGAGAAAACTTGAACATTCATGAGGATTCTTTGCTTGCAAGTGGCACTCGGGAAGATATTGGAGATTGGCAGCTACATTTAAAATCAATGGATGATTTGGAACTGCACTATTCAGGATTTCGCACACCTCACTTTCATAATTTGTCTGATCTTGTTGAGGAAAATCTAGCATTACAAATACGGAAACATGCAAAACTGCAGCTATCTGACTCAATAGACGATGCTCCTAATGTGTTAGTTTTTCAGATTATTGGTGGATTTCCTTTCACAACAGATATTGTACTAATCACTGGAACTGATTTAGAAAGTTTTCGAGAAGAAGAGCGTGTCACTATGCTTACAGGTATGTCACTTTCCAATCAACTGAAATATAAAGAACAGGAATTTGACAAGAAGTTTGATAAAATTTTCAATTTGGCCAAGAAGGTAGATTCTGAATCCATATCTGTTGGTAAGGCAGCCATTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTCTTTCAAGAATCCTGAATCTTAGAGAAGATGTCAATTATATATCATATTGGCCTACCGAGCTTTACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGTTGGGATATTCATATCTCATTGGATATCATTGGACATTGGTTAGATTTGATGAATATAGATGGATGGATACCACGTGAGCAAATTCTGGGGGCTGAATCATTGAGTCGGGTCCCTGAGGAATTTGTTCCTCAGCATCCAACAAATGGAAACCCTCCAACTCTGTTTTTAGCATTAAATGATATAATTAATGGATTGAAGAATAACGAATTTACTGCAAGGGATGGAAGTGAAATCTCTCTATTCCTGGAACGTGCCTTTGTTCGCTTGGAAGCATGGTTCCATTGGTTTAATACAACTCAATCAGGGAAACAAATGAGCAGCTACTATTGGCATGGACGAGACAATAGGACAATGCGTGAAATAAATCCCAAGGCACTGTCCTCCGGATTGGATGATTATCCACGAGCTTCACACCCAAGTGAAGATGAGTACCACTTGGATCTTAGATGCTGGATGTTACTTGCAGCAGATTGTATGCATTCCATTCAAGAGTTGTTAGATATGGAAAGCAAACCTGGCATGGATTATGGTTATACTGCGAAGTTGCTATCGAACTTTGAGTTGCTTAACCAGATGCATTTTGATAGTGCATATGACGCGTACTTTGATTTTGGAAATCATTCGGAGAAGGTTCAACTTAGATGGAAAGAAGTGGAGGCAGGAAACTATGCTACTCGCCAACTTGTCCGGGATGTTACGGAGATACCTGTATTGAGATTGGTTCCTCACATTGGTTATGTTAGTTTCTTCCCATTCATGGGGAGGATCATTCCATCTGAATCGTGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCTTATGGACCGAGTATGGACTACGTTCTCTTGCCAAAACAAGTTCATTGTACATGAAGCACAACACAGAGCATGACCCTCCATACTGGAGAGGTCCAGTCTGGATAAACATGAATTACAGAATCCTTTCAGCGCTCCACCATTACTCCCAAGTGAATGGGCCATATCAGGAGAAAGCTAAAGCTGTCTACGAAGAATTGAGAAGCAATTTAATAAGAAATATAGTGCGCAATTATCAACAAAGTGGATTTTTGTGGGAACAGTACGATCAGATTAAGGGTAAGGGAAAAGGGGCTCATCCATTTACTGGCTGGACATCGCTTGTAGTATTAATCATGGCGGAAGCATATGGCAATATTTAG	2550	0.4184	MTGSGRTTVRNRANSLSDADSRRERRPLLNRHRERSKYGSTIPIFNTANLKLVLGICFVGFFTIFFMIRHLMNSVTEPKLPRAVTPFPAPKIMDLPQFQGEHKESLYWGTYRPHTYFGIRARTPKSLMAGLMWIGVKDGRYHLRHVCRHEDDLSTYGWTKHNGRDFGNQVLVDHGMTFTTRFLKSKVEGSGYGGDWAVRINVEIDKSLWNEEFGRGAQLFFYLADEAGNALDVSRENLNIHEDSLLASGTREDIGDWQLHLKSMDDLELHYSGFRTPHFHNLSDLVEENLALQIRKHAKLQLSDSIDDAPNVLVFQIIGGFPFTTDIVLITGTDLESFREEERVTMLTGMSLSNQLKYKEQEFDKKFDKIFNLAKKVDSESISVGKAAIGNLLGGIGYFYGQSKIALSRILNLREDVNYISYWPTELYTAVPSRSFFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNIDGWIPREQILGAESLSRVPEEFVPQHPTNGNPPTLFLALNDIINGLKNNEFTARDGSEISLFLERAFVRLEAWFHWFNTTQSGKQMSSYYWHGRDNRTMREINPKALSSGLDDYPRASHPSEDEYHLDLRCWMLLAADCMHSIQELLDMESKPGMDYGYTAKLLSNFELLNQMHFDSAYDAYFDFGNHSEKVQLRWKEVEAGNYATRQLVRDVTEIPVLRLVPHIGYVSFFPFMGRIIPSESWILEKQLELISNRSLLWTEYGLRSLAKTSSLYMKHNTEHDPPYWRGPVWINMNYRILSALHHYSQVNGPYQEKAKAVYEELRSNLIRNIVRNYQQSGFLWEQYDQIKGKGKGAHPFTGWTSLVVLIMAEAYGNI	849

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco4g02032	849	SUPERFAMILY	Six-hairpin glycosidases	335	847	IPR008928	GO:0005975
	Phco4g02032	849	Gene3D	-	375	848	IPR012341	GO:0005975
	Phco4g02032	849	MobiDBLite	consensus disorder prediction	16	33	-	-
	Phco4g02032	849	Gene3D	-	93	374	IPR038518	-
	Phco4g02032	849	MobiDBLite	consensus disorder prediction	1	15	-	-
	Phco4g02032	849	MobiDBLite	consensus disorder prediction	1	33	-	-
	Phco4g02032	849	FunFam	mannosyl-oligosaccharide glucosidase	375	846	-	-
	Phco4g02032	849	FunFam	Mannosyl-oligosaccharide glucosidase GCS1	93	374	-	-
	Phco4g02032	849	Pfam	Glycosyl hydrolase family 63 N-terminal domain	105	265	IPR031631	-
	Phco4g02032	849	PANTHER	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	53	846	IPR004888	GO:0004573\|GO:0009311
	Phco4g02032	849	Pfam	Glycosyl hydrolase family 63 C-terminal domain	348	844	IPR031335	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco4g02032	Phco-Chr4	40424123	40435468	Proximal

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco4g02032	4	40424123	40435468	Phco4g02032	4	40424123	40435468	ECH