Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01998 ATGTGCTTGAAGAAGTACGATTCCTACGGAGAAGAGGGGATGATGTTTTGCAAATTAAGAAAGGGAAAACAAAATTATCCTCAAAGCATAGCCAAGAGAGCTCTAAACTTGTCACAACTTGGAAGTGTGTCAATTGAGACATCACTGTTTGTGATTTGGAGGTTGACAATGTCTGCTGCTGTGTCTGCAACAAAGGATGTTCCCTTCAATGCTCAGTTGGAGGAAGACCTCACAAACAAAGGAACCAATAACAAGGTTGTTGGGGAAGCAGACCGTGTTCCTTACAATGAGGATGCTGAAGGAACTGAGTCAGAGGCAGAGGAAGACCCCAAGTTGGAATTGGATCTTGGCCCTCAGTTTTCCCTCAAGGAACAGATTGAGAAAGACAAAGATGATGAAAGTTTGAGAAAATGGAAGGAACAGCTTCTGGGAAGTATTGATGTGTCTGCTGTTGGAGAGAACAAAGAGCCAGAAGTGAAGATAGCGAGCCTCACCATAATATGTCCAGGGAGGCCTGACCTCATTCTACCAATTCCATTTACTTCTGATGCTAAGAAGAGTATCTTCACTCTCAAGGAAGGAAGTCAATACCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCCGGCCTCAAATACAACAATGTTGTTTGGAAAACTGGGGTTAGAGTGGACAACACTAAGAAAATGTTGGGAACTTACAGCCCAAGGCAGGAACCATATACATATGAATTGGAGGAAGAAACTACCCCTTCAGGGTTATTCGCCAGGGGAACCTATTCAGCCAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGACACCTGTTACCACTTTGAAATTCAGAAGAGTTGGCCAAAACCCATTTAA 882 0.4308 MCLKKYDSYGEEGMMFCKLRKGKQNYPQSIAKRALNLSQLGSVSIETSLFVIWRLTMSAAVSATKDVPFNAQLEEDLTNKGTNNKVVGEADRVPYNEDAEGTESEAEEDPKLELDLGPQFSLKEQIEKDKDDESLRKWKEQLLGSIDVSAVGENKEPEVKIASLTIICPGRPDLILPIPFTSDAKKSIFTLKEGSQYRLKFSFTVSNNIVSGLKYNNVVWKTGVRVDNTKKMLGTYSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTCYHFEIQKSWPKPI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01998 293 SUPERFAMILY E set domains 100 290 IPR014756 -
Phco4g01998 293 Gene3D Coagulation Factor XIII, subunit A, domain 1 113 291 IPR024792 -
Phco4g01998 293 PRINTS RHO protein GDP dissociation inhibitor signature 149 164 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Phco4g01998 293 PRINTS RHO protein GDP dissociation inhibitor signature 268 285 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Phco4g01998 293 PRINTS RHO protein GDP dissociation inhibitor signature 226 241 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Phco4g01998 293 PRINTS RHO protein GDP dissociation inhibitor signature 209 225 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Phco4g01998 293 MobiDBLite consensus disorder prediction 80 111 - -
Phco4g01998 293 FunFam Rho GDP-dissociation inhibitor 1 112 291 - -
Phco4g01998 293 PANTHER RHO GDP-DISSOCIATION INHIBITOR 100 290 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Phco4g01998 293 Pfam RHO protein GDP dissociation inhibitor 102 287 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01998 Phco-Chr4 39653577 39655898 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g03001 2 58713283 58714768 Phco4g01998 4 39653577 39655898 PCT