Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01978 ATGGGGTCCAAAGGCTCCATCTCGATGAAGCTTTTGCTGCTTCTGCATTTGGCCATTCTCTGTGCTTCACAGGATTTTGATTTCTACTACTTTGTTCAGCAGTGGCCAGGATCTTACTGTGACACACAGAACAGTTGCTGCTACCCAACCACTGGGAAACCCGCTGCAGATTTTGGCATTCATGGGCTGTGGCCTAATTACAAAGATGGTTCTTACCCGTCTAACTGTGATTCAAACAATCGTTTTCAGCAATCCCAGATATCAGATTTGACAAGCAGTTTGCAGAGAAATTGGCCCACTCTAGCATGCCCAAGTGGTAACGGGGTCCAATTCTGGACCCACGAATGGGAGAAACATGGCACTTGCTCCGAGTCACTCCTTAAGCAACATGACTATTTTGAAGCAGCTCTCGATCTGAAGCAGAGAGCGAACCTCCTCCGAGCTCTTACAAATGCTGGGATACAACCAGATGGAGGGTTTTACAGTCTGAGCAACATCAAGGGGGCTATAAAAGATGCAACTGGGTACACTCCATACATTGAGTGCAATGTGGATGCATCACGTAACAGCCAGCTTTACCAAGTTTATTTGTGTGTGGACACTTCAGGGTCTGGCTTCATCGAATGCCCTGTGTTCCCTAAAGGCAAATGTGGGTCCCAAGTTGAGTTCCCAACTTTCTAA 681 0.4699 MGSKGSISMKLLLLLHLAILCASQDFDFYYFVQQWPGSYCDTQNSCCYPTTGKPAADFGIHGLWPNYKDGSYPSNCDSNNRFQQSQISDLTSSLQRNWPTLACPSGNGVQFWTHEWEKHGTCSESLLKQHDYFEAALDLKQRANLLRALTNAGIQPDGGFYSLSNIKGAIKDATGYTPYIECNVDASRNSQLYQVYLCVDTSGSGFIECPVFPKGKCGSQVEFPTF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01978 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
Phco4g01978 226 FunFam Ribonuclease 3 20 226 - -
Phco4g01978 226 CDD RNase_T2_euk 26 223 IPR033697 -
Phco4g01978 226 PANTHER RIBONUCLEASE T2 22 219 IPR001568 GO:0003723|GO:0033897
Phco4g01978 226 SUPERFAMILY Ribonuclease Rh-like 20 225 IPR036430 GO:0003723|GO:0033897
Phco4g01978 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
Phco4g01978 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Phco4g01978 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01978 Phco-Chr4 39360481 39361671 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01978 4 39360481 39361671 Phco4g01978 4 39360481 39361671 ECH