Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01963 ATGAAGTTTGGAAAAGAATACAAAGCACAAATGGTGCCTGAGTGGCAAGAGGCATACATGGATTACAATTTTATGAAATCCCAGTTGAAGGAAATCCAACGTTTCAGACAGAGGACAAAAGCTCCTGCAGCGACACCAAGAGGACTGAGGCGAAAGCTAACAATGTACAGAGCCTTCAGTGGTCTCACAAACAGACAGTACCACCCTCTGAGTCCCTCCGGTGACATCGAGAGCCAGCACATCGTGGTGCAGGCGGTGAACCGGGGGGGTTCGGAGAGGTACGAAACGACGTTTCTGATGAGCTCAGACGAAGGGGGAGAGTACGAGTTGGTGTACTTCAAGAGACTGGACGACGAGTTGAACAAGGTGGAGAAGTTCTACAGAGGGAAAGTGGAGGAGGTGATGAAGGAAGCTGCTATGCTGAACAAGCAAATGGACGCTTTCATCGCCTTCAGGATCAAAGTTGAGAACCCAACTGCTTCCTTTCATCGCTCCCTCGAGATGACTCGCCTTGCCTCTGATGTTGCTTCTTCAACCGCTGTTCTTTCTGCTTCCACGCCCAGAGGAGCCAAACTCAACAGAAAGGCTTCGATGATTATGGAAGTTATTGAAGAGGGTAGCACTCATCATGAACAATCAGATGATTCTAATGATGATCAAGAAGAACAAGTAAAACAAACTGTTAAACCAAAAGTTCAGGAAAAGAAGCCAAAGAATCTGAGGGGTACTAGACCAGCTCCTTTGGAAGTACTTGATCATGTGCAATTCAACCACACCTTTGAAACTCCACGTTCAACTATGAAAGGTGTTCTCAATTTCCCTGCCCACACAGAACTACAATTCAGCAGAAAAAATTTGGAAAAAGTTGAGGAACAACTTCAACGCTCATTCATTGAATTCTATCGCAAGCTTCGGCTTCTAAAAAGCTTTAGCTTTCTAAATACCTTGGCATTTTCAAAGATAATGAAGAAATATGATAAGATCACAACAAGAGATGCAGCCAAGGCTTATATGAAAATGGTAGACAACACCCAACTTGGAAACTCTGATGAGGTCACTAAACTCATGGATAGGGTTGAAAAAACATTCACTAAGCACTTCCACAACTCAAATCGTAGCAAAGCCATGAATATCTTAAGACCAAAAGCAAAGAGGGAAAGACACAGAGTTACATTTTCCATGGGTTTCTTAGCAGGATGCACAGCAGCTCTGGTGTTAGCCCTTATTCTAATCGTTCGTACCCGAAAAATATTGGATCATTCAGGGAGTACTAAGTACATGGAAACCTTGTTCCCACTGCATAGTCTTTATGGATACGTAGTTCTACACTTGCTGATGTATGCTGCTGATATATACTTCTGGAGGCGGTACAGAGTGAACCACTCATTCATATTTGGCTTTAAGCAAGGCACTGACTTAGGCTACAATCAAGTCCTTCTGCTCGGTTTTGGTCTAGCAGTGTTGGCACTGGGTGGTGTGCTTGTAAACCTAGACATGCAGATAGATCCACAGACACAAGATTACCAAACATTGACTGAACTCATTCCACTCATCTTGCTTCTTGCTGTGATTGCTATTTTATTGTGCCCCATAAACATCTTTTATCGCTCAAGCAGGGTTTTCCTCCTCGTATGCCTATTTCACTGTATATGTGCACCTCTTTACAAGGTCACACTCCCGGATTTTTTCTTGGCAGATCAATTTACTAGCCAGGTGCAAGCCTTGAGAAGTTTTGAGTTCTACATTTGCTACTACGGCTGGGGTAATTTCAAAAAGAGAGAAGACACTTGCGACTCTAGCAGCGTATTCATCACGTTTTCATTCATCGTGGCTGTTATTCCCTACTGGTCCCGTTTCCTGCAGTGTCTTAGGCGGCTGTTCGAAGAGAAAGATCCAATGCAAGGATATAACGGATTGAAATACTTCCTTACAATTATTGCTGTTTGCCTAAGGATAGCGTATAGTCGTAACAATTCAATGGTGTGGAAAGTGTTGGCCTGGGTTTTCTCAATATTTGCTGCAGTTGCTTCTACATATTGGGACCTTGTAATAGACTGGGGCCTTTTGCAAAGGCGTTCCAAGAATCGCTGGTTGAGGGACAAACTCGCAATCCCTCATAAAAGCGTATACTTTATAGCCATGGTCCTTAACGTCTTGTTGAGATTTGCCTGGTTGCAGACAGTCTTGAGATTCAACGTCAACTTCTTGCATAAACATGCCATGACTACCATTGTTGCATGTCTGGAGATCATTCGTCGTGGCATATGGAACTTCTTCAGATTGGAAAATGAGCACTTGAACAATGTGGGCAAGTACCGTGCATTCAAGTCTGTGCCTCTACCCTTCAATTACGACGAAGACGAAGATAAAGATGAGTGA 2379 0.4355 MKFGKEYKAQMVPEWQEAYMDYNFMKSQLKEIQRFRQRTKAPAATPRGLRRKLTMYRAFSGLTNRQYHPLSPSGDIESQHIVVQAVNRGGSERYETTFLMSSDEGGEYELVYFKRLDDELNKVEKFYRGKVEEVMKEAAMLNKQMDAFIAFRIKVENPTASFHRSLEMTRLASDVASSTAVLSASTPRGAKLNRKASMIMEVIEEGSTHHEQSDDSNDDQEEQVKQTVKPKVQEKKPKNLRGTRPAPLEVLDHVQFNHTFETPRSTMKGVLNFPAHTELQFSRKNLEKVEEQLQRSFIEFYRKLRLLKSFSFLNTLAFSKIMKKYDKITTRDAAKAYMKMVDNTQLGNSDEVTKLMDRVEKTFTKHFHNSNRSKAMNILRPKAKRERHRVTFSMGFLAGCTAALVLALILIVRTRKILDHSGSTKYMETLFPLHSLYGYVVLHLLMYAADIYFWRRYRVNHSFIFGFKQGTDLGYNQVLLLGFGLAVLALGGVLVNLDMQIDPQTQDYQTLTELIPLILLLAVIAILLCPINIFYRSSRVFLLVCLFHCICAPLYKVTLPDFFLADQFTSQVQALRSFEFYICYYGWGNFKKREDTCDSSSVFITFSFIVAVIPYWSRFLQCLRRLFEEKDPMQGYNGLKYFLTIIAVCLRIAYSRNNSMVWKVLAWVFSIFAAVASTYWDLVIDWGLLQRRSKNRWLRDKLAIPHKSVYFIAMVLNVLLRFAWLQTVLRFNVNFLHKHAMTTIVACLEIIRRGIWNFFRLENEHLNNVGKYRAFKSVPLPFNYDEDEDKDE 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01963 792 ProSiteProfiles SPX domain profile. 1 339 IPR004331 -
Phco4g01963 792 ProSiteProfiles EXS domain profile. 598 792 IPR004342 GO:0016020
Phco4g01963 792 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 787 - -
Phco4g01963 792 Pfam EXS family 431 766 IPR004342 GO:0016020
Phco4g01963 792 MobiDBLite consensus disorder prediction 206 242 - -
Phco4g01963 792 Pfam SPX domain 1 341 IPR004331 -
Phco4g01963 792 Coils Coil 279 299 - -
Phco4g01963 792 CDD SPX_PHO1_like 2 335 IPR034092 -
Phco4g01963 792 MobiDBLite consensus disorder prediction 206 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01963 Phco-Chr4 38806222 38811211 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01963 4 38806222 38811211 Phco4g01963 4 38806222 38811211 ECH