Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01962 ATGAAGTTTGGGAAGGAATTTGCTGCACAAATGGTACCAGAATGGCAGCAAGCATACATGGATTATGGGTACCTAAAATCGCTCTTGAAAGAAATCATAGTTCAGAAGCAAAGAAACAAGCCTCATTCGAGTGCCACCCCATCAGTTCTAAAGAGAAAGTTATCACTCTACAGAACATTCAGTGGCCTCACACAGAGGCATTACCAACCCTCGAGCCCCGACCAGGATATTGAGAACCAACCCATTTTGGTGCACTCAGTGGTGCGAGATGGTCATGAAAATTTTGAAACTACCTTTCATATGAGCGCAGAAGAAGGTGGAGAGTACGAGTTGGTGTACTTCAGGAGACTTGATGACGAGTTCAACAAAGTGGTGAGGTTCTATAGGTCCAAAGTTGAAGAAGTAATGAAGGAAGCTGCTGAGTTGAACAAGCAAATGGATGCTTTAGTAGCATTCAGGGTAAAAGTTGAGAATCCAAATGAGTCATTTGATTGCTCAGTTGAGATGACTCGTCTTGCTTCTGATGTGTCTGCTTCAACCACAGTTTTGCATGCTAATACACCCAGGGGAGTCCAGCTCAACAGAAGGATTTCCACGGTAATTGAAGACATAAGAGAGGAAGGAAGTTCCCACGATGGACATTTAGAGAAGTTTGACAATTTTGTGGAAGGTATAGTGATTGAAACTACTAACAAAAAAGTTGAAGTACAGAACAAGAAGAAGAATATCAGACCTATCAAACCCATCAAACCTGCTTCTGTGGAAATACTTAATCGAGTGCAGCTAAATAACACATATGAGACTCCTCGTTCAACTATAAGAGGCATCATCAAATACCCTGGCCAAGCAGAGTTAAATTTCACCAAGGAAAATTTGAGCAAAGTAGAAGAAACACTCAAACGGGCTTTTGTTGAGTTTTATCAGAAGCTTCGACTTCTAAAGAACTACACATTTCTAAATGTGTTGGCATTTTCAAAGATAATGAAGAAATATGACAAGATCACATCAAGAGGTGCAGCAAAAGCTTACATGAAAATGGTTGATAACTCCTGCCTTGGGAGCTCTGATGAGGTCACCAGGCTTATGGAGAGGGTGGAAAATGTATTCATTAAGCACTTTTCCAACTCCAATCGAAATAAAGGAATGAGCATCCTGCGACCTAAACCAAAGAGAGAAAGGCACAGGATTACATTTTCCATGGGTTTTTCTGCCGGATGCACTGCTGCTCTAACAGTGGCTCTTATTCTAATTGTCCGTACGCGTAAAATCATGGATCATTCAGGAAGTAGCAAATACATGGAAATTATGTTTCCTCTTTACAGTTTATTTGGATTTGTAGTTTTACACATGCTGATGTACGCTGCTAATATATACTTCTGGAGGCGATACAGAGTGAACCATTCATTCATATTTGGTTTTAAGCAAGGCACTGACTTAGGCTACAATCAAGTCCTTCTCCTTAGTTTTGCCCTGGCAGCATTGGCACTAACCAGCGTGCTTGTAAATCTAGACATGCAAATAGATCCTGTGACAAAAGATTACAAATTATTCACTGAACTTTTGCCCCTTATCTTGGTTCTAATTGTGATATCCATTTTATTATGCCCATTAAACATCGTATATCGATCAAGCCGAGTGTTCTTCCTTGCATCTCTGTTTCACTGCATCTGTGCTCCTCTATACAAGGTCACACTGCCGGATTTCTTCATGGCAGATCAATTTACAAGCCAGGTTCAAGCCTTGAGAAGTTTTGAGTTCTACATATGCTACTATGGTTGGGGTGACTTCAAACACAGAGAAACAAATTGCAAGTCAACAAGGGTATTCATAGCTTTCTCATTTATTGTCGCTGTGATTCCATACTGGTCTCGCTTTCTTCAGTGCCTAAGGCGCCTTTACGAGGAGAAAGATATAATGCAAGGATATAACGGGTTGAAGTATTTCCTCACTATTGCAGCTGTTTGCCTCAGAACAGCTGATAGTCTTGATGGAGGAATTCGTTGGAAAGTGATGGCCTGGATATTCTCAATATCTACAGCCATTTTCTCCACATATTGGGACCTTGTCATAGATTGGGGCCTCCTCCAAAGACATTCCAAGAACCGATGGCTCAGAGACAAACTCCTACTCCCTCATAAAAGTGTCTATTTCGCAGCTATGGTGCTGAATGTCTTGTTAAGGTTTGCATGGTTACAGACAATATTGAATTTCAAATTAACCTTGCATAGACAAGCCATGATCAGCATTGTTGCCAGCTTAGAGATCATTCGTCGTGGCATATGGAACTTCTTTAGGGTGGAGAATGAGCATTTGAACAATGTTGGCAAGTACCGTGCATTCAAGTCTGTGCCTCTACCCTTCAACTACAACGAAGATGATGAAGATGGAGATAAGGAGGAGCAATTTGGCAGGAACATGCAATAG 2424 0.4113 MKFGKEFAAQMVPEWQQAYMDYGYLKSLLKEIIVQKQRNKPHSSATPSVLKRKLSLYRTFSGLTQRHYQPSSPDQDIENQPILVHSVVRDGHENFETTFHMSAEEGGEYELVYFRRLDDEFNKVVRFYRSKVEEVMKEAAELNKQMDALVAFRVKVENPNESFDCSVEMTRLASDVSASTTVLHANTPRGVQLNRRISTVIEDIREEGSSHDGHLEKFDNFVEGIVIETTNKKVEVQNKKKNIRPIKPIKPASVEILNRVQLNNTYETPRSTIRGIIKYPGQAELNFTKENLSKVEETLKRAFVEFYQKLRLLKNYTFLNVLAFSKIMKKYDKITSRGAAKAYMKMVDNSCLGSSDEVTRLMERVENVFIKHFSNSNRNKGMSILRPKPKRERHRITFSMGFSAGCTAALTVALILIVRTRKIMDHSGSSKYMEIMFPLYSLFGFVVLHMLMYAANIYFWRRYRVNHSFIFGFKQGTDLGYNQVLLLSFALAALALTSVLVNLDMQIDPVTKDYKLFTELLPLILVLIVISILLCPLNIVYRSSRVFFLASLFHCICAPLYKVTLPDFFMADQFTSQVQALRSFEFYICYYGWGDFKHRETNCKSTRVFIAFSFIVAVIPYWSRFLQCLRRLYEEKDIMQGYNGLKYFLTIAAVCLRTADSLDGGIRWKVMAWIFSISTAIFSTYWDLVIDWGLLQRHSKNRWLRDKLLLPHKSVYFAAMVLNVLLRFAWLQTILNFKLTLHRQAMISIVASLEIIRRGIWNFFRVENEHLNNVGKYRAFKSVPLPFNYNEDDEDGDKEEQFGRNMQ 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01962 807 ProSiteProfiles SPX domain profile. 1 345 IPR004331 -
Phco4g01962 807 Coils Coil 125 145 - -
Phco4g01962 807 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 792 - -
Phco4g01962 807 Pfam SPX domain 1 347 IPR004331 -
Phco4g01962 807 CDD SPX_PHO1_like 2 341 IPR034092 -
Phco4g01962 807 ProSiteProfiles EXS domain profile. 604 797 IPR004342 GO:0016020
Phco4g01962 807 Pfam EXS family 436 771 IPR004342 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01962 Phco-Chr4 38787876 38797034 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01962 4 38787876 38797034 Phco4g01962 4 38787876 38797034 ECH