Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01648 ATGATGGGCACCACTACCCTGATCAGATGCTCCCAGGCCAACGCGCTCTTCAGAGCTGTCAAAGCCAAACCCGGCAATTCTTCGCTGCCAGTTTCTTCAATGCGCATCAACAAAGGTACTGGTGGAAAGAAGGCATATGATGCATTGTTGTTGGATGCTGGGGGCACCCTTTTGCAATTGGCGAAACCAGTTGAGGACACTTATGCTGATATTGGATCCAAATATGGTGTGATTGTGGATCCGGCTAAGATAAAGCAAGGATTTAAGAGAGCATTTGCTGCTCCGTGGCCTGAAAAGCTGCGCTACCAGGGAGATGGGAGGCCATTCTGGAAACTTGTAGTTTCTGAAGCCACTGGTTGTGGAGATGAAGACTATTTTGAGGAAGTTTATGAGTACTATGCTAGAGGGGATGCGTGGCATCTTCCAGATGGAGCTCATGAAGCAATTACTCTTCTCAAGGGTGCTGGAGTTAAGATGGCTGTTGTATCCAATTTTGACAACCGCTTAAGGAAGCTACTGAAGGATCTGAATGTCTTAAATCTATTTGATGCTGTCATTATATCATCAGAGGTCGGATATGAAAAACCAGATTCAAGAATATTCCAAGCTGCTCTAGATCAAGTAAATGTGGAGGCTTGCAAAGCTTTACACATTGGAGATGATGAAAAGGCAGATAAACTGGGGGCCAATGATGTGGGGATTGATTGCTGGTTATGGGGTATCGATGTGAAGACATTCTCTGATATACAAAATCGCATTCTCAATTCAGAGGCATAA 777 0.4466 MMGTTTLIRCSQANALFRAVKAKPGNSSLPVSSMRINKGTGGKKAYDALLLDAGGTLLQLAKPVEDTYADIGSKYGVIVDPAKIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSEATGCGDEDYFEEVYEYYARGDAWHLPDGAHEAITLLKGAGVKMAVVSNFDNRLRKLLKDLNVLNLFDAVIISSEVGYEKPDSRIFQAALDQVNVEACKALHIGDDEKADKLGANDVGIDCWLWGIDVKTFSDIQNRILNSEA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01648 258 NCBIfam HAD-IA family hydrolase 153 233 IPR006439 -
Phco4g01648 258 CDD HAD_dREG-2_like 145 255 - -
Phco4g01648 258 Gene3D - 62 134 IPR044924 -
Phco4g01648 258 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 46 238 - -
Phco4g01648 258 Pfam Haloacid dehalogenase-like hydrolase 123 236 IPR041492 -
Phco4g01648 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 200 220 IPR006439 -
Phco4g01648 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 182 198 IPR006439 -
Phco4g01648 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 152 165 IPR006439 -
Phco4g01648 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 46 57 IPR006439 -
Phco4g01648 258 PANTHER - 32 256 - -
Phco4g01648 258 Gene3D - 50 238 IPR023214 -
Phco4g01648 258 SFLD Haloacid Dehalogenase 46 238 - -
Phco4g01648 258 SUPERFAMILY HAD-like 46 239 IPR036412 -
Phco4g01648 258 NCBIfam HAD hydrolase, REG-2-like, family IA 49 238 IPR011949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01648 Phco-Chr4 16320973 16324348 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01648 4 16320973 16324348 Phco4g01648 4 16320973 16324348 ECH