Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01621 ATGGCATCAGGGACTGAGGTGCCGGATACATCTGTTTTCGAGAGGTTCGAGCGAAACAGAGACATTTCTCTGTTTCTGCCTTTTCTCTTTGGCCTCTCAGACACTACCCCAGGACGAGATAGCGACGATCTACGTCCTGGAAACGGGAACACTGAAGGCTCCCAGCGTCAAAGAATCATCTTGGTGAACCCCTTCACTCAAGGCATGGTGGTCATCGACGCCGATTCGCACCTCGAAGCTCTGTTTCGCGAACTCGGGAGCGGAAAAGGTGGTAGACCTCCGGCTTCGAAAGAATCAATTTTGGCCATGCCGAGTGTGGAGATTACAGAGGGTTGTGAGGATTTGGAGTGTGTGGTTTGTTTGGAGGAGTTTGGGGTTGGTGGGGTGGCGAAGGAGATGCCTTGTAAGCACAAGTTTCATGGTGATTGTATTGAGAAGTGGTTGGGGATGCATGGGTCTTGCCCTGTGTGTAGGTATGAGATGCCCGTGGAGAAGAATTGGGGGAAGAAGAGCGAGGAAGAAGGGGGAGAGAGGAGAAGGGATGGTGGTGGTAGTGGTGATGAAGTTTGGGTTAGTTTTTCTTACAATAGGATTAGGAGAGGCCGGGATAATGATCAAACTGCTTCAAATGATGATTCTCCATCAAGTCTTGGAGACGATGCTGTAGGGAGTTAG 675 0.5037 MASGTEVPDTSVFERFERNRDISLFLPFLFGLSDTTPGRDSDDLRPGNGNTEGSQRQRIILVNPFTQGMVVIDADSHLEALFRELGSGKGGRPPASKESILAMPSVEITEGCEDLECVVCLEEFGVGGVAKEMPCKHKFHGDCIEKWLGMHGSCPVCRYEMPVEKNWGKKSEEEGGERRRDGGGSGDEVWVSFSYNRIRRGRDNDQTASNDDSPSSLGDDAVGS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01621 224 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 55 162 - -
Phco4g01621 224 FunFam E3 ubiquitin-protein ligase RNF181 84 164 - -
Phco4g01621 224 MobiDBLite consensus disorder prediction 201 224 - -
Phco4g01621 224 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Phco4g01621 224 SMART ring_2 117 157 IPR001841 -
Phco4g01621 224 MobiDBLite consensus disorder prediction 169 189 - -
Phco4g01621 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 164 IPR013083 -
Phco4g01621 224 Pfam Ring finger domain 116 158 IPR001841 -
Phco4g01621 224 SUPERFAMILY RING/U-box 111 164 - -
Phco4g01621 224 MobiDBLite consensus disorder prediction 169 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01621 Phco-Chr4 15883613 15884287 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01621 4 15883613 15884287 Phco4g01621 4 15883613 15884287 ECH