Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01582 ATGGAGTTTTTCACCAAAACCAACGTGGTGAGGCTGCGGAGCCACCTCGACAAGTATCTCGTGGCCGACGCCGACGGCAGCCAAGTTCACCAGAGCCGCAAGGCCTCCGGCCGGGGAGCGCGGTGGACGGTAGAGGAGATAACTGAGGGAGGAACGGATAAGGTGCGCCTCAGGAGCTGCCACGGAAGGTACTTAACGGCGACGGAGGCTCCGTTTCTGTTTGGGATGACAGGGAAGAAGGTGCTCCAGACGGAGTTCGAGCCCGGCGCTGATTTCAAGCACAACTGGGAAGTGACACGCGACGGGTTTCAGGTGAAGTTGATGTGTTGGAGCGGGAAGTTCCTCCGCGCGAACGGAGGGACACCGCCTTGGCGGAGCAGCGTGACGGTGGACGAACCGCACAGTTCGGCGACGAAGGATTGGGTTCTGTGGGATGTGGAGACTGTGGAGGCGGTGGAAGAGTTGGTGGATGATTTGTGCGAGAGCGTGGTTTCGTCTCTCGCTTCTGATGATGTCTCGGTCGATTCGGAACCAGCGTCGCCGATGACGGTTTTCGGGCTCAAGTCGCCGCCGGCAAGGCAGAACACGAAGCTGATGCTGCAGGCCGAGTCAGCACTTCAACCTAGCTGCCATAGCTTATCCATGTCTCACTGTCTCACTCTGAATCTTTTATTTAAGTGGGCCCAGTCATCAATTCAACTTAACTGCAATGCATTCATCTTCTCATCATATTATTGCACACTACTCATGCAGACAATAAGTTCGAACAAGTTCAGAACTGGCATGGACTTCTTCCACCGCGCGAAGGCGGTGCGTCTCCGCAGCCACCTCGACAAGTACCTGCTGGCGGAGGAGGACGAAGAGTCGGTCACGCAAGCCCGCAACGGATCCTCGAAGAGCGCGCGGTGGATGGTCGAATACGTGTCCGAATACGACAACATAATTCGCCTGAAGAGCTGTTACGGCAAGTACCTCACAGCCTCCAACCTCCTCTTCCTGCTGGGCATGACGGGCCACAAGGTCCTCCAGACCCTCCCGCAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCATCAAGGACGGAGGCCGCGTCAAGCTCAAGACTCGCTATGGCAACTTCCTCCGCGCCAATGGGGGCTTGCCGCCCTGGAGAAACTCCGTCACGCACGATATTCCTCACAGGACCGCCACGCAGGACTGGATCCTCTGGGACGTGGAAGTCGTCGAGATTTATGTCAACTCTCCGGCGAATAGCAGTAAACCCTCTGCTCCCCCGTTGCCGGTTTCCGACACTGTTCCAGTCCTGGCCAGCGCGCCGTTGCCCCCGCCCCCATCCTTGTCTGCTAGCTTTACAAGGCAACAGTCGAATGATTTGAATGGTTCGTCGACGAAGATGGAAGGGCGGATTATTTACTACCATATAGCAGAAGACAATGGAGAGGTGTTGGATGAAGATGTGCAGGGGTATTCTTTGATTTTCAAAGGGAATGGAGTTGAAGAATTGACTCGAAAGTTTGAGGAAGAGACAGAGCTAGATGGAATCATTGTATGTAATCGGAGTCCTTTGAATAATAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCAAACACCGTGACCATGCGGGTTGTTTTGGTTCTTCCCATGTCAAGTGTGGCAAGAGACTTAGAGGCACAAGGCTTTCTGTGA 1686 0.5516 MEFFTKTNVVRLRSHLDKYLVADADGSQVHQSRKASGRGARWTVEEITEGGTDKVRLRSCHGRYLTATEAPFLFGMTGKKVLQTEFEPGADFKHNWEVTRDGFQVKLMCWSGKFLRANGGTPPWRSSVTVDEPHSSATKDWVLWDVETVEAVEELVDDLCESVVSSLASDDVSVDSEPASPMTVFGLKSPPARQNTKLMLQAESALQPSCHSLSMSHCLTLNLLFKWAQSSIQLNCNAFIFSSYYCTLLMQTISSNKFRTGMDFFHRAKAVRLRSHLDKYLLAEEDEESVTQARNGSSKSARWMVEYVSEYDNIIRLKSCYGKYLTASNLLFLLGMTGHKVLQTLPQRLDSSVEWEPIKDGGRVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTATQDWILWDVEVVEIYVNSPANSSKPSAPPLPVSDTVPVLASAPLPPPPSLSASFTRQQSNDLNGSSTKMEGRIIYYHIAEDNGEVLDEDVQGYSLIFKGNGVEELTRKFEEETELDGIIVCNRSPLNNKLYPLRLQLPPNTVTMRVVLVLPMSSVARDLEAQGFL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01582 561 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 262 545 - -
Phco4g01582 561 Gene3D - 270 390 - -
Phco4g01582 561 Gene3D - 4 147 - -
Phco4g01582 561 SUPERFAMILY Actin-crosslinking proteins 7 147 IPR008999 -
Phco4g01582 561 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Phco4g01582 561 Pfam Domain of unknown function (DUF569) 262 403 IPR007679 -
Phco4g01582 561 SUPERFAMILY Actin-crosslinking proteins 266 408 IPR008999 -
Phco4g01582 561 FunFam BnaC05g19630D protein 266 406 - -
Phco4g01582 561 FunFam BnaC05g19630D protein 5 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01582 Phco-Chr4 14992005 14999696 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01582 4 14992005 14999696 Phco4g01582 4 14992005 14999696 ECH
Phco4g01582 4 14992005 14999696 Phco8g02637 8 38489547 38495688 PCT