Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01562 ATGGATCAGTTACCATTCACGACTCCGAGAGGATCTTTGTCATCCAGCATTGGAGACGCTTCAGAGCTTGAGTGCAATCTCACACTCAGTGATAGGCTCAAGGTTTTCAAAAGCTCCTCCTTTGATCCCAATAACTATGTCGCCTCCAAATCCCGCAGCATGAACGAAAAGGAGATAAAACACTTGTGCGCCTATCTTATTGACCTGAAGAAGGCTTCAGCAGAAGAAATGCGTAAAAGTGTTCTTGCTAACTACTCAGCCTTCATACGTACGTCCAAAGAGATATCTGATCTTGAGGGAGAGTTGCTTTCCATGAGAAATCTTCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCAGATGGGTGCGAGCTTAGTCCCATGATTAGTGGAAATGAAGATTTAGACATGGATGACATACTAGATGAAAAAACAGAAATATCCAAGACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAGGTTCTATTAGCGGAGAAAAGAGTGGATGAAGCTATGGCTGCTTTGGACGAAGGAGAAAAAATGGTAAAAGAAATTAGTGAAGGGAGAACATTTTTAACTCCAACTTTATTTGAGGCATTGCAAGATGCTATTGCTGAACAGAGACAAAAACTAGCAGATCAACTAGCAGAAACTATCTGCCAGCCATCAACTCGCAGTGCAGAGATTCGATCAACAGCGTTGTCATTGAAAAAACTTGGGGATGGTCCTCGTGCTCATTCGTTACTACTAAGTTCTCGACAAGGAACATTACAACGTAGCATGAAATGCCTTCAATCCAGCAATTATGGGGTTGGGTCATTTACTACTACCATTTCACAGCTTGTTTTTTCCACCATTTCACAAGCAGCATCAGATTCTTTGTCAGTGTTTGCTGAAGAAGAACCCGCATATACCTCTGAGCTAGTAACTTGGGCAGTGGCACAGGCTGAGAAATTTGCTGCTTTGCTTAAGAAATGTATTCTTGCTTCTACAGCTGCCGCAGGAGGTTTGAGAGTAGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGCTATCTGCTAGAGGCTACTGGGCTAGCCCTTTCCCCTGTCCTAATAAAATATTTTAGGCCGTTTGTTGAGCAAGCACTGAAAACAGATTTGAAAAGAATTGAACAAAGTAGTTCTGCACTGGCTGCTGCAGAGGATTGGGTACTTGCTTATGCACCAACCAGCAGCAGGTCTTCTGGCCAACCTCCATCTTCTCACAGTACCTTAGGTTTGCTCCAACCAAAGCTTTCAATCAGTGCTCACAAATTCAACTCAATGGTTCTGGAACTATTTGAAGATGTAGGGCCTCTTGAAATACTGCAATTGGATGTTCTTGCAGTTGAAGGCCTTATACAAGAGTTCAACTTCTATGTCAATTTGCTAATAAATGCATTGCCAGGATCAGTGGTAACTGAGAACCTGGAAGGGCACAGAATTGTTAAGATTGCTGAGACTGAAGCACAGCAGATAGCATTGTTGGCAAATGCAATATTACTGGCAGATGAGCTGCTTCCACGTGCTGTTTTCAAGCTTTCACATAGCACCAAAGGTGATGAGTCTCATAGAAAAGGAGCAGACAAACAGCGTGAACTAAAGAAAAGGCTCCAACGTGAAGTTGATCACCTGCGTGACAGCTTTTGCCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGAGAAGCTCGTCTAAACGCATTAATATATTTGGGAATGGATGGTAACGTAGAGCAGCCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGATTTTTGCTAAGCTTACCGAAGTGGCAAGCACTGCAGCAGACGTGTTTGTAGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTTGCAGAAACAGTGGTCCTGTGGCTTTCTGATGACCAAGCCTTCTGGGAAGAGGTTGAGACAGGATCAACACCTTTGGGTCCCATAGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAACATTATTGAAAGGGCTATTAATGCTCTTGCTGCTACAGGTCTAGATCCCAACAGTGTCTTGCCTGAGGATGAATGGTTTGTTGAAGTTAGTGAGATTTCTATAAAGATGTTAACCGGCAGAGCTGCCTTTGATAGTGTAGAGGAAGATATTCCTAGCCCCACTTCAGTTGTCCAAACATAG 2253 0.4274 MDQLPFTTPRGSLSSSIGDASELECNLTLSDRLKVFKSSSFDPNNYVASKSRSMNEKEIKHLCAYLIDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLADGCELSPMISGNEDLDMDDILDEKTEISKTEKWLIGYLETLEVLLAEKRVDEAMAALDEGEKMVKEISEGRTFLTPTLFEALQDAIAEQRQKLADQLAETICQPSTRSAEIRSTALSLKKLGDGPRAHSLLLSSRQGTLQRSMKCLQSSNYGVGSFTTTISQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVAQAEKFAALLKKCILASTAAAGGLRVASECVHVCMSHCYLLEATGLALSPVLIKYFRPFVEQALKTDLKRIEQSSSALAAAEDWVLAYAPTSSRSSGQPPSSHSTLGLLQPKLSISAHKFNSMVLELFEDVGPLEILQLDVLAVEGLIQEFNFYVNLLINALPGSVVTENLEGHRIVKIAETEAQQIALLANAILLADELLPRAVFKLSHSTKGDESHRKGADKQRELKKRLQREVDHLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEIFAKLTEVASTAADVFVGRERFATVLLMRLAETVVLWLSDDQAFWEEVETGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINALAATGLDPNSVLPEDEWFVEVSEISIKMLTGRAAFDSVEEDIPSPTSVVQT 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01562 750 PANTHER EXOCYST COMPLEX COMPONENT 8 16 748 IPR033961 GO:0000145|GO:0006887
Phco4g01562 750 Pfam Exocyst component 84 C-terminal 152 363 IPR032403 -
Phco4g01562 750 Pfam Vps51/Vps67 36 114 - -
Phco4g01562 750 SUPERFAMILY Cullin repeat-like 144 379 IPR016159 -
Phco4g01562 750 Gene3D - 273 377 IPR042560 -
Phco4g01562 750 Gene3D - 142 264 IPR042561 -
Phco4g01562 750 Coils Coil 537 557 - -
Phco4g01562 750 Coils Coil 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01562 Phco-Chr4 14704305 14710227 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01562 4 14704305 14710227 Phco4g01562 4 14704305 14710227 ECH