Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01540 ATGGCTCTCTCAACTCTATCCCGCCGCGGCCTCAGATCCACTCTCTTCAAGCCCTTATCCGCCGCCGTCTCCTCCCGCCCGATCTCCTCCGATGCCCCCCTCACCATCGAGACCTCTGTGCCCTTCACCGCGCACAATTGCGAGGCTCCCTCACGCGCCGTTACCACCTCCTCCTCCGAGCTCCTCTCCTTCTTCCGTCAGATGGCCCTCATGCGCCGAATGGAGATCGCCGCCGACTCCCTCTACAAGGCCAAACTCATCCGCGGATTCTGCCACCTCTACGACGGCCAGGAGGCCGTCGCCATCGGCATGGAGGCCGGCATCACCAGAAAAGACTGCATCATCACCGCCTACCGCGACCACTGCACCTTCCTCGGCCGCGGCGGCTCGCTGCTCGAAGTGTTCGCGGAGCTGATGGGGCGCAAGGATGGGTGCTCTAAAGGGAAAGGGGGTTCGATGCACTTTTATAGGAAGGAGGGTGGATTCTACGGTGGGCACGGGATCGTGGGGGCGCAGGTTCCCTTAGGGTGTGGTTTAGCTTTTGCGCAGAAGTATAGTAAGGATGAGACTGTGACTTTTGCCTTGTATGGAGATGGGGCTGCCAATCAGGGACAGCTTTTTGAGGCGCTTAACATTGCTGCGCTTTGGGATCTTCCTGCTATCTTGGTCTGTGAGAATAATCACTATGGGATGGGGACTGCGGAGTGGAGGGCTGCAAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTGCCTGGCTTGAAGGTGGATGGCATGGACGTTCTTGCTGTTAAGCAAGCTTGCAAATTTGCAAAAGAACATGCTTTGAAGAATGGGCCTCTTATTCTTGAGATGGATACTTATAGATACCATGGTCACTCTATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAAATATCTGGTGTGAGACAGGAACGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGTCTCATGACATTGCTGCTGAAAAGGAGCTAAAGGACATTGAAAAAGAAGTCAGAAAAGAAGTTGACGAAGCCATTGCTAAAGCAAAGGAGAGTCCAGTGCCAGATCCATCTGAGTTATTTAGCAATGTGTACGTTAAAGGTTTAGGAGTTGAGGCATTTGGTGTTGATAGGAAAGTAATGAGAGCTACTTTACCATAA 1176 0.5255 MALSTLSRRGLRSTLFKPLSAAVSSRPISSDAPLTIETSVPFTAHNCEAPSRAVTTSSSELLSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAGITRKDCIITAYRDHCTFLGRGGSLLEVFAELMGRKDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPVPDPSELFSNVYVKGLGVEAFGVDRKVMRATLP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01540 391 Gene3D - 23 387 - -
Phco4g01540 391 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 59 371 IPR017597 GO:0004739|GO:0006086|GO:0043231
Phco4g01540 391 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 49 372 IPR029061 -
Phco4g01540 391 CDD TPP_E1_PDC_ADC_BCADC 64 354 - -
Phco4g01540 391 FunFam Pyruvate dehydrogenase E1 component subunit alpha 24 384 - -
Phco4g01540 391 MobiDBLite consensus disorder prediction 294 313 - -
Phco4g01540 391 Pfam Dehydrogenase E1 component 67 362 IPR001017 GO:0016624
Phco4g01540 391 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 27 373 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01540 4 14361115 14366712 Phco4g01540 4 14361115 14366712 ECH