Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01534 ATGATGTTTCTTCTTCTTGTCAGCCTTGTTGTTTTGCAAGGCTTTGTAATACCAACCTGCTATTGCCAGATCAATAATCCTCAGAATATTGAAACATTTTATCCATTACAAACTTCAGAACCACCCCTCCCAATCCAACCTCCTGAGCCACCGTCAGAGCCACAGGCATCACCACCGTCATCAGGACCAGTGGCTGCAACAAAAGCATCTTCATCGAACAGTAAGGTAGGAACAGCAGTAGCTGCAACTGCAGCAAGCACTCTTGTTGTTTCTGGTTTGGTTTTCTTCTTGGTTAGAAGGTGCTTCAGAACAAGGAAGAGAAAGGAGACAATAAAGAACGCTGCTTCTGCTGTAGATAGGCGTGTTGCACCTCAGGTAGAGGTGTTTGAGAGAATGGAAGGAAACGTGAAGGGACTGATCCTTGATGAGGATGGTTTGGATGTTATTTATTGGAGAAAACTTGAAGGTAAAAGGATGCCAGAAAAGGGTTTCCAAAGGGAGGTGTTGGATGGCCCCCAAGATAAAGAAGGTGTTCATGAGGGAAATCCAGGGAAAAGAACTGAATCCATTCAAGAAACTCCTCTTCTTAGAGAGAGATCTTCAACTTCCCACATGAACATATTTCTTCCAGAAGAGTCCTACACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCACTGTTCCTTCATCATCAGTTGGAGGCTCTCCTACCCAACCATCTTCTCCTTCCTTTACCCCTTCATCACCAAAACCACTCTCCACTTTTTTCTCAACAATTCCAAACATTACAAATTCTGCAACACCAATAGCCCCTCCAAAAGTACCTGATAAAAAGAATGAAGCTCCAATACCAGCATCAGCAGCAGCACCACCTCCACCAATTCTAGATAAAAAGAACTCGCCACAACCACCTCCTCCTCCTCCTCCAATTCCAAAACACATGAACTCAGCAGGAGCAGCTCCTCCTCCTCCTCCTCCTCCACCAATCCCTCCTAGAAAGAGTCCAGCACCACCACCTCCTCCACCAAAGGCAAGTGGTTTGAAGTCGTCATCAAAACCGCCACCTAATCCTATTGAAAGAACAGCAGGTACCACAAGTAAGCAAGGAGACACTTCACCTGAGGTAAAACTTAAGCCATTACATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTGTGGGACAAAATAGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAATCTCTCTTCGGGTTAATCGCCACCAACCGAAATGATAATGCCCCCAAAGAAAATAACTCAACGAGTTCTAGCAGGGATGCTTTGGCTCCATCCTCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCTATTGTTCTGAAATCTCTGACAGTCTCTCGTAAAGACATTATTGAAGCGCTCATTGACGGTCAAGGCCTTAACATAGAAACCATTGAAAAGCTTGGTAGAGTTGCCCCAACAGAAGAAGAGCAATCACTTGTACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGAAGCCGAATCTTTCTTACGTCACATTCTCAAAGCTGTTCCTTCAGCATTTAAGCGATTGAATGCCTTGCTATTCAGGTTGAATTATGACTCCGACATTCAAGAAATCAAGGAGTTTCTGCAGACCCTTGAGATGGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAACTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCAGAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTGAACCGCAATAGCAGTTTGAGTCGTAGTAGCAGCATGAACAGTAACAACAGTGGAGCGTCTCAAAACTCTTATTCTTCAAATGAACAAAGACAAAGGGAATATATAACAATAGGATTGCCAGTTGTGGGAGGGATCAGTTCTGAGTTTTCCAACGTGAAGAAAGCTGCTGTTACAGATTACAAAAGTTTTGTTGGTTCAATCTCAGCGCTGTCGGCGAGGATTCTTGAGATTCGAGAACTTGTTTCCCAGTGTGGAAGTGATATGGGAGGGAACTTTGGGAGAGAAATGAACCGTTTTCTTGAAAATGCTGAGGAAGAATTGAGATTAGTGAGGGAAGAGCAAACAAGGGTGATGAAAATTGTGAAAAAAACAACAGATTATTATCAAGGAGGAGCTTCAAATGATAGTGTAGATCATCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGCAAAGTGCTAACCATTGGAGGTTTGGAAATACTATGAGGGAGTGTGTGCTTTTGCATTGA 2472 0.4341 MMFLLLVSLVVLQGFVIPTCYCQINNPQNIETFYPLQTSEPPLPIQPPEPPSEPQASPPSSGPVAATKASSSNSKVGTAVAATAASTLVVSGLVFFLVRRCFRTRKRKETIKNAASAVDRRVAPQVEVFERMEGNVKGLILDEDGLDVIYWRKLEGKRMPEKGFQREVLDGPQDKEGVHEGNPGKRTESIQETPLLRERSSTSHMNIFLPEESYTIMRIPPPAPPPTVPSSSVGGSPTQPSSPSFTPSSPKPLSTFFSTIPNITNSATPIAPPKVPDKKNEAPIPASAAAPPPPILDKKNSPQPPPPPPPIPKHMNSAGAAPPPPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPNPIERTAGTTSKQGDTSPEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMESLFGLIATNRNDNAPKENNSTSSSRDALAPSSNAFLLDPRKSQNIAIVLKSLTVSRKDIIEALIDGQGLNIETIEKLGRVAPTEEEQSLVLAYEGDPSKLAEAESFLRHILKAVPSAFKRLNALLFRLNYDSDIQEIKEFLQTLEMGCKELRNQGMFVKLLEAVLKAGNRMNAGTQRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNSSLSRSSSMNSNNSGASQNSYSSNEQRQREYITIGLPVVGGISSEFSNVKKAAVTDYKSFVGSISALSARILEIRELVSQCGSDMGGNFGREMNRFLENAEEELRLVREEQTRVMKIVKKTTDYYQGGASNDSVDHLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKQSANHWRFGNTMRECVLLH 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01534 823 MobiDBLite consensus disorder prediction 40 58 - -
Phco4g01534 823 Gene3D Formin, FH2 domain 389 811 IPR042201 -
Phco4g01534 823 MobiDBLite consensus disorder prediction 232 269 - -
Phco4g01534 823 MobiDBLite consensus disorder prediction 286 349 - -
Phco4g01534 823 MobiDBLite consensus disorder prediction 350 373 - -
Phco4g01534 823 MobiDBLite consensus disorder prediction 36 69 - -
Phco4g01534 823 SMART it6_source 368 801 IPR015425 -
Phco4g01534 823 MobiDBLite consensus disorder prediction 162 186 - -
Phco4g01534 823 MobiDBLite consensus disorder prediction 217 231 - -
Phco4g01534 823 SUPERFAMILY Formin homology 2 domain (FH2 domain) 381 802 - -
Phco4g01534 823 Coils Coil 726 753 - -
Phco4g01534 823 ProSiteProfiles Formin homology-2 (FH2) domain profile. 368 812 IPR015425 -
Phco4g01534 823 Coils Coil 546 566 - -
Phco4g01534 823 MobiDBLite consensus disorder prediction 216 380 - -
Phco4g01534 823 MobiDBLite consensus disorder prediction 162 204 - -
Phco4g01534 823 PANTHER FORMIN-RELATED 39 802 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Phco4g01534 823 MobiDBLite consensus disorder prediction 635 660 - -
Phco4g01534 823 Pfam Formin Homology 2 Domain 372 786 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01534 Phco-Chr4 14314031 14316743 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01534 4 14314031 14316743 Phco4g01534 4 14314031 14316743 ECH