Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01518 ATGTCCGATCCTTCGAGGGGTCGCGTTACCATCACTCTAGGGCGTAGTGGTCAGGTTGTGAAGAGGGATGTATCTTCTGTAGATGTTTCTTCTTTCTCTTCTCTAACCTCAGCTGGCACGAAGCGGTCTGTAAGAGACAGGATTGGAAATAATGCAGATGGTTCTGTGTGGCACGGAAATGGACTTGGCGGCAATAAACGACAACGAGGAGATTTAAGCATACAAAATGGACTGGATGGCAATGATCTTCGGTTGAAGCTCATGCAAAAAAGTGCATCTAGGCATGCTGACAACAATGGTAGTAAGAGGCATATGGATCTCCGTGAAAAACTTTCAAAGACAACTCACCCACTGACAAATAGTTTTAATTCAAAGCAGCGCATGCCAGAATCAAGGGAAACAAGTTTGTTGAGGCAAATTCCCTCTGCCAGAAGTTCTGATGATTTAATGCGCATGGAATCCATGAGAAGCTCGTACTCTCCTTGGACATTGGATCATATAAGGAGAAGATCACCAGATGGGTTTCCGAGTACTTCCAGGGGTATTTCCCCGCAAAGGGATGTCCAAGACCTACAGAGAAGGCCATTAAACAGGACATATGATGGTGTCAGGCCAGGTCCATATGTAAGTAGGGATGTTCTTGAAACTTCGAGGCCTCCAGTAAGTGCACCTCAATCTTTCATGTCACGCTCCTCAATGTCCACATTGCCTCCAGTAACTGCCAAGCCTGTAGCATCTCATGCTGCTGGCCAACTTCCTCCATCAAGCAGTGTTGCCCAAAGGTCATCGTATGTGGGTGATGAACAAGTACAACAACCAAACCAGACTGTGGATGGCCTGTTACATGCACTAGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGATCTCAAAGAGCTAGGGATTCCTATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCCCGTACCAAGCGTCAACAATGA 1011 0.459 MSDPSRGRVTITLGRSGQVVKRDVSSVDVSSFSSLTSAGTKRSVRDRIGNNADGSVWHGNGLGGNKRQRGDLSIQNGLDGNDLRLKLMQKSASRHADNNGSKRHMDLREKLSKTTHPLTNSFNSKQRMPESRETSLLRQIPSARSSDDLMRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQDLQRRPLNRTYDGVRPGPYVSRDVLETSRPPVSAPQSFMSRSSMSTLPPVTAKPVASHAAGQLPPSSSVAQRSSYVGDEQVQQPNQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01518 336 Pfam SAM domain (Sterile alpha motif) 273 328 IPR001660 GO:0005515
Phco4g01518 336 MobiDBLite consensus disorder prediction 197 267 - -
Phco4g01518 336 ProSiteProfiles SAM domain profile. 272 335 IPR001660 GO:0005515
Phco4g01518 336 SUPERFAMILY SAM/Pointed domain 274 328 IPR013761 -
Phco4g01518 336 PANTHER SCP160 119 332 - -
Phco4g01518 336 MobiDBLite consensus disorder prediction 219 239 - -
Phco4g01518 336 MobiDBLite consensus disorder prediction 109 152 - -
Phco4g01518 336 MobiDBLite consensus disorder prediction 250 267 - -
Phco4g01518 336 FunFam DDHD domain-containing 2 275 336 - -
Phco4g01518 336 MobiDBLite consensus disorder prediction 45 75 - -
Phco4g01518 336 SMART SAM_4 269 334 IPR001660 GO:0005515
Phco4g01518 336 MobiDBLite consensus disorder prediction 114 142 - -
Phco4g01518 336 Gene3D - 274 336 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01518 Phco-Chr4 14025860 14037999 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01518 4 14025860 14037999 Phco4g01518 4 14025860 14037999 ECH