Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01515 ATGCCGGGGCACCGCTCGAAGTCGGAGAAGCACGACGACGGCGAGAAGCAGCTCCGGCGGGATCCCTACGAGGTCCTTGGCGTCTCGCGCAACTCCATGGATCAGGAAATCAAAACCGCGTACCGCAAAATGGCGCTCAAATATCATCCAGACAAGAATGCAAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCTTACAATATCCTCTCAGATCCTGACAAACGGCGTCAATATGACTCGGCTGGTTTTGAGGCCGTTGAATCAGACAACCAAGAATTGGAGTTAGATCTTTCAAGTTTGGGGGCTGTCAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCCGCATCTATTTTGGAAGAAGCACTCAATGGTTTAGTGACCATTCGTCCACTTCCATTAGGACATTATGTATCTAAAAGGGTTGAGAAGCAATGTGCACACTTCTACTCAGTTACAATAACAGAAGAGGAAGCACGAGCTGGATTTGTTTGTCGAGTACAATCATCAGACAAAAGCAAGTTCAAGTTATTATATTTTGATCAGGAAGACAATGGTGGTTTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACAGGGAAGATTACCACTGCTGGGATGTATTTTCTTGGGTTTCCTGTTTATCGATTGGACCAAACAATGAACTCTATAGCTGCTGCTAAGGATCCGGATACATCTTTTTTCAGAAAGTTGGATGGGTTTCAGCCTTGTGAATTAAATGAATTGAAGGCTGGTACCCATGTATTTGCTGTCTATGGTGACAACTTTTTCAAAAGTGCAAATTATACAATAGAAGCCCTCTGTGCTGCACCTCTTAGTGAAGAAAAAGAAAATTTAAGAAGTATAGAAGCTCAAATCTTGTCTAAAAGGGCCGAAGTATCAAAGTTTGAGGCAGAATATCGAGAGGTTCTGGCTCAATTCTCAGAGATGACAAGTAGATATGCACATGAAATTCAATCTATTGATGAGCTACTGAAGCATAGAAATGAAATACATGCATCATACACTATTACTCCCTTTAAACGGAGTACAAGTAAGAGCAGAAGTAAAAGTTCTTCCAAGGAGAACAAAGAAGATGGCCAAACAAGAGAGAAGAGGAGTACAAGAGATCGGCCAAAGAAGAAGAAATGGTATAACCTCCACTTAAGAGTCGATAAGAGAAAGGCTTGCTAA 1230 0.4146 MPGHRSKSEKHDDGEKQLRRDPYEVLGVSRNSMDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSASILEEALNGLVTIRPLPLGHYVSKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNGGLSLALQEDSAKTGKITTAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELNELKAGTHVFAVYGDNFFKSANYTIEALCAAPLSEEKENLRSIEAQILSKRAEVSKFEAEYREVLAQFSEMTSRYAHEIQSIDELLKHRNEIHASYTITPFKRSTSKSRSKSSSKENKEDGQTREKRSTRDRPKKKKWYNLHLRVDKRKAC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01515 409 MobiDBLite consensus disorder prediction 367 386 - -
Phco4g01515 409 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Phco4g01515 409 Gene3D DnaJ domain 5 104 IPR036869 -
Phco4g01515 409 SMART dnaj_3 20 78 IPR001623 -
Phco4g01515 409 PRINTS DnaJ domain signature 41 56 IPR001623 -
Phco4g01515 409 PRINTS DnaJ domain signature 58 78 IPR001623 -
Phco4g01515 409 PRINTS DnaJ domain signature 23 41 IPR001623 -
Phco4g01515 409 PRINTS DnaJ domain signature 78 97 IPR001623 -
Phco4g01515 409 MobiDBLite consensus disorder prediction 1 29 - -
Phco4g01515 409 MobiDBLite consensus disorder prediction 356 397 - -
Phco4g01515 409 CDD DnaJ 21 75 IPR001623 -
Phco4g01515 409 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 408 - -
Phco4g01515 409 FunFam Chaperone protein dnaJ 16 4 103 - -
Phco4g01515 409 Pfam DnaJ domain 21 83 IPR001623 -
Phco4g01515 409 Coils Coil 291 318 - -
Phco4g01515 409 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
Phco4g01515 409 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Phco4g01515 409 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01515 Phco-Chr4 13951259 13955256 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01515 4 13951259 13955256 Phco4g01515 4 13951259 13955256 ECH