Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01486 ATGGCAGGAGTTGCACCACCACCCAAACCAGAAGAGCTTCAGCCGCACCCTGTGAAAGACCAACTTCCAAATGTTTCCTACTGCATCACTAGTCCTCCTCCTTGGCCGGAGGCGATTCTACTTGGTTTCCAACATTACCTGGTGATGCTTGGCACAACTGTGCTAATACCAAGCTCTCTACTTACTCAGATGGGAGGAGGAAACGAAGAAAAAGCAAAAATGATCCAGACTATGTTGTTTGTAGCTGGCGTGAACACATTGTTCCAAACACTATTTGGGACTCGTCTACCTGTGGTTATTGGAGGATCCTTCACCTTTGTGCCTACTACCATTTCAATAATTTTGGCTAGTCGCTACAGTGACATTGTGAATCCTCAGGAGAGATTTGAGAGGATAATGCGTGGGACGCAGGGTGCGCTTATTGTTGCTTCGACTCTCCAAATTGTTGTTGGATTCAGTGGACTCTGGCGCAATGTAGTGAGGTTCTTAAGCCCTCTCTCTGCTGTTCCCCTGGTTGCTCTGTCAGGCTTTGGACTTTATGAGTTGGGCTTTCCTGTGCTTGCAAAGTGTGTGGAGATTGGGCTGCCAGAAATTGTAATCTTACTAGTATTTTCACAGTACATTCCTCATGTGATGAAAGGACAAAAGCCTATCTGTGATCGGTTTGCAGTTATATTCTCAGTAACAATTGTGTGGATTTATGCTCATCTTCTCACTGTGGGTGGAGCATATAAACATGTACCACAGACAACTCAGGAAACGTGCAGAACTGATCGTGCTGGCATTATAAGTGGTGCACATTGGATTAGAATCCCATATCCATTCCAATGGGGAGCTCCTACATTTGATGCTGGGGAAGCTTTTGCTACGATGGCTGCTTCATTTGTTGCACTAGTAGAGTCAACCGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCATTGCCACCTTCAGTTCTTAGCCGTGGTGTTGGTTGGCAGGGGGTAGGAATTTTATTATCTGGGATCTTTGGAAGCGGGAATGGATCATCAGTTTCCGTAGAAAATGCTGGACTCTTGGCTTTGACAAGAGTTGGTAGCCGAAGGGTTGTTCAAATATCAGCAGGATTCATGATCTTTTTCTCCATACTTGGAAAATTTGGAGCCGTGTTTGCTTCAATCCCAGCTCCAATAGTTGCAGCTTTATATTGCCTTTTCTTTGCCTATGTGGGTTCTGCAGGCCTCAGTTTCCTTCAGTTTTGCAATTTAAACAGCTTCAGAACTAAATTCATCTTGGGATTCTCTATTTACATGGGCCTCTCTATACCACAATACTTCAACGAGTACACAGCATTTAAGAACTATGGTCCAGTGCACACCCATGCTAGATGGTTCAACGACATGATCAATGTCCCATTCTCATCAAAAGCATTTGTTGCTGGTTCATTGGCACTGTTCTTGGATGCCACATTGCACAACAAAGACAATCAAACTCGTAAAGACAGAGGCATGCATTGGTGGGACAGATTCAGCTCATTCAAGACAGATACAAGGAGTGAGGAGTTTTACTCACTTCCTTTCAATCTAAACAAGTTCTTCCCCTCTGTGTGA 1596 0.4436 MAGVAPPPKPEELQPHPVKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSSLLTQMGGGNEEKAKMIQTMLFVAGVNTLFQTLFGTRLPVVIGGSFTFVPTTISIILASRYSDIVNPQERFERIMRGTQGALIVASTLQIVVGFSGLWRNVVRFLSPLSAVPLVALSGFGLYELGFPVLAKCVEIGLPEIVILLVFSQYIPHVMKGQKPICDRFAVIFSVTIVWIYAHLLTVGGAYKHVPQTTQETCRTDRAGIISGAHWIRIPYPFQWGAPTFDAGEAFATMAASFVALVESTGAFIAVSRYASATPLPPSVLSRGVGWQGVGILLSGIFGSGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSIYMGLSIPQYFNEYTAFKNYGPVHTHARWFNDMINVPFSSKAFVAGSLALFLDATLHNKDNQTRKDRGMHWWDRFSSFKTDTRSEEFYSLPFNLNKFFPSV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01486 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
Phco4g01486 531 NCBIfam purine/pyrimidine permease 39 437 - -
Phco4g01486 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01486 Phco-Chr4 13442397 13446292 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01486 4 13442397 13446292 Phco8g02837 8 41763077 41766634 PCT